RiceNCexp:Browse

LncRNA Genes Basic Information

We obtained 7898 novel rice lncRNAs based on transcript assembly. The names of these novel lncRNAs are prefixed with "OSA-LNCN".

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

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total numbers: 11014

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Name	Ref_name	Classification	Chromosome	Start	End	Strand	DE/TSE
OSA-LNC112939716	LOC112939716	Antisense	Chr1	38317	39565	-	N/N
OSA-LNC107281753	LOC107281753	Intergenic	Chr1	101576	102684	-	N/N
OSA-LNC112936174	LOC112936174	Antisense	Chr1	163111	169478	+	Y/N
OSA-LNC107279520	LOC107279520	Antisense	Chr1	171000	172079	+	Y/N
OSA-LNC107280189	LOC107280189	Antisense	Chr1	303330	306444	-	Y/N
OSA-LNC107280387	LOC107280387	Intergenic	Chr1	403666	404719	-	Y/N
OSA-LNC107280385	LOC107280385	Intergenic	Chr1	404877	405848	+	Y/N
OSA-LNC112936901	LOC112936901	Antisense	Chr1	537031	538361	-	Y/N
OSA-LNC107279864	LOC107279864	Antisense	Chr1	596068	596997	-	Y/N
OSA-LNC107281806	LOC107281806	Intergenic	Chr1	664497	664851	+	N/N
OSA-LNC107278096	LOC107278096	Intergenic	Chr1	685838	686818	+	Y/N
OSA-LNC107278804	LOC107278804	Intergenic	Chr1	715622	719437	-	Y/N
OSA-LNC112937438	LOC112937438	Antisense	Chr1	719613	722857	+	Y/N
OSA-LNC107278390	LOC107278390	Antisense	Chr1	748764	749578	-	Y/N
OSA-LNC107282088	LOC107282088	Intergenic	Chr1	781183	785596	-	Y/N
OSA-LNC4326111	LOC4326111	Overlapping (AS)	Chr1	792460	796511	-	Y/N
OSA-LNC9271150	LOC9271150	Intergenic	Chr1	804083	809495	-	N/N
OSA-LNC4326113	LOC4326113	Intergenic	Chr1	808993	810958	+	Y/N
OSA-LNC107279476	LOC107279476	Antisense	Chr1	848376	857425	+	Y/N
OSA-LNC107281768	LOC107281768	Antisense	Chr1	915911	920716	-	Y/N
OSA-LNC107281770	LOC107281770	Intergenic	Chr1	927756	929216	-	Y/N
OSA-LNC107281771	LOC107281771	Antisense	Chr1	954966	957322	-	Y/N
OSA-LNC4326032	LOC4326032	Antisense	Chr1	1126507	1127402	-	Y/N
OSA-LNC107279845	LOC107279845	Intergenic	Chr1	1596475	1597634	-	Y/N
OSA-LNC112937711	LOC112937711	Intronic (AS)	Chr1	1813464	1814015	+	Y/N
OSA-LNC9270186	LOC9270186	Intergenic	Chr1	1928584	1930385	+	Y/N
OSA-LNC112937813	LOC112937813	Antisense	Chr1	1957384	1961546	+	Y/N
OSA-LNC107281247	LOC107281247	Antisense	Chr1	2000404	2003964	-	Y/N
OSA-LNC9269282	LOC9269282	Intergenic	Chr1	2015872	2018915	-	Y/N
OSA-LNC112937819	LOC112937819	Antisense	Chr1	2050644	2053348	-	Y/N
OSA-LNC107279875	LOC107279875	Intergenic	Chr1	2175036	2177680	+	N/N
OSA-LNC112937828	LOC112937828	Intergenic	Chr1	2306689	2309619	-	N/N
OSA-LNC107280502	LOC107280502	Intergenic	Chr1	2459434	2462326	+	Y/N
OSA-LNC9270286	LOC9270286	Intergenic	Chr1	2481149	2483247	+	Y/N
OSA-LNC9272216	LOC9272216	Intergenic	Chr1	2488350	2491415	+	Y/N
OSA-LNC4324509	LOC4324509	Intergenic	Chr1	2903064	2906103	-	Y/N
OSA-LNC112937863	LOC112937863	Antisense	Chr1	3243138	3244484	-	N/N
OSA-LNC112937870	LOC112937870	Antisense	Chr1	3360497	3361212	+	Y/N
OSA-LNC107279810	LOC107279810	Intergenic	Chr1	3431587	3432472	+	Y/N
OSA-LNC112939558	LOC112939558	Intergenic	Chr1	3535991	3536715	+	N/N
OSA-LNC112937906	LOC112937906	Intergenic	Chr1	3642070	3645058	-	Y/N
OSA-LNC9266294	LOC9266294	Antisense	Chr1	3825601	3827612	+	N/N
OSA-LNC112937940	LOC112937940	Intronic (AS)	Chr1	3861938	3863641	+	Y/N
OSA-LNC107279010	LOC107279010	Antisense	Chr1	3918548	3921258	-	Y/N
OSA-LNC112937943	LOC112937943	Intergenic	Chr1	3998449	4002787	+	Y/N
OSA-LNC9271473	LOC9271473	Intergenic	Chr1	4297755	4302902	-	Y/N
OSA-LNC107280580	LOC107280580	Intergenic	Chr1	4641888	4643286	-	N/N
OSA-LNC4325665	LOC4325665	Intergenic	Chr1	4665711	4669960	+	N/N
OSA-LNC107279861	LOC107279861	Intergenic	Chr1	4737866	4739011	+	Y/N
OSA-LNC9270260	LOC9270260	Intergenic	Chr1	4789629	4795347	+	Y/N
OSA-LNC4326781	LOC4326781	Intergenic	Chr1	4848454	4852261	-	Y/N
OSA-LNC112938004	LOC112938004	Antisense	Chr1	4872501	4873108	+	Y/N
OSA-LNC107279634	LOC107279634	Antisense	Chr1	5038676	5041878	+	N/N
OSA-LNC107281763	LOC107281763	Intergenic	Chr1	5074351	5075371	-	Y/N
OSA-LNC4327320	LOC4327320	Intergenic	Chr1	5103247	5108984	-	Y/N
OSA-LNC107279882	LOC107279882	Antisense	Chr1	5109086	5114851	+	Y/N
OSA-LNC112939592	LOC112939592	Intergenic	Chr1	5336917	5338069	+	N/N
OSA-LNC107281454	LOC107281454	Intergenic	Chr1	5397398	5399281	+	Y/N
OSA-LNC112937661	LOC112937661	Intergenic	Chr1	5757445	5758353	-	N/N
OSA-LNC112938205	LOC112938205	Antisense	Chr1	5855179	5857260	-	N/N
OSA-LNC107279203	LOC107279203	Antisense	Chr1	6017045	6023648	+	Y/N
OSA-LNC107277386	LOC107277386	Intergenic	Chr1	6327501	6330823	-	Y/N
OSA-LNC112937656	LOC112937656	Intergenic	Chr1	6609740	6610752	+	N/N
OSA-LNC107279549	LOC107279549	Overlapping (AS)	Chr1	6655883	6663338	-	Y/N
OSA-LNC112938268	LOC112938268	Intergenic	Chr1	6656764	6657263	+	Y/N
OSA-LNC9272073	LOC9272073	Intergenic	Chr1	7414712	7415381	-	N/N
OSA-LNC107280227	LOC107280227	Intergenic	Chr1	7485846	7492309	-	Y/N
OSA-LNC112938773	LOC112938773	Intergenic	Chr1	7528485	7529214	+	N/N
OSA-LNC107280519	LOC107280519	Intergenic	Chr1	7626117	7633946	-	Y/N
OSA-LNC107281439	LOC107281439	Intergenic	Chr1	7706154	7707652	-	Y/N
OSA-LNC4327712	LOC4327712	Intergenic	Chr1	8465568	8469431	-	Y/N
OSA-LNC107279884	LOC107279884	Intergenic	Chr1	8629349	8629908	+	Y/N
OSA-LNC9266121	LOC9266121	Intergenic	Chr1	8630343	8633652	-	Y/N
OSA-LNC9269653	LOC9269653	Intergenic	Chr1	8689073	8689827	-	Y/N
OSA-LNC112938363	LOC112938363	Intergenic	Chr1	8779448	8779762	+	N/N
OSA-LNC112939620	LOC112939620	Intergenic	Chr1	8831901	8832744	+	N/N
OSA-LNC4326210	LOC4326210	Intergenic	Chr1	9042204	9054052	-	Y/N
OSA-LNC9267774	LOC9267774	Antisense	Chr1	9651104	9653152	+	Y/N
OSA-LNC4327910	LOC4327910	Intergenic	Chr1	10159759	10163114	+	Y/N
OSA-LNC9268070	LOC9268070	Intergenic	Chr1	10214075	10217437	+	Y/N
OSA-LNC107281754	LOC107281754	Intergenic	Chr1	10220729	10222048	+	Y/N
OSA-LNC4327917	LOC4327917	Antisense	Chr1	10272713	10276158	+	Y/N
OSA-LNC107280332	LOC107280332	Antisense	Chr1	10313724	10316449	-	Y/N
OSA-LNC112938688	LOC112938688	Intergenic	Chr1	10319464	10320575	+	Y/N
OSA-LNC9269543	LOC9269543	Intergenic	Chr1	10346243	10350000	-	Y/N
OSA-LNC9271424	LOC9271424	Intergenic	Chr1	10932443	10933680	-	Y/N
OSA-LNC112938710	LOC112938710	Intergenic	Chr1	10940633	10943978	-	Y/N
OSA-LNC112938726	LOC112938726	Intergenic	Chr1	11012203	11013811	+	Y/N
OSA-LNC112938729	LOC112938729	Intergenic	Chr1	11070816	11071962	+	Y/N
OSA-LNC4325783	LOC4325783	Intergenic	Chr1	11075066	11077908	+	Y/N
OSA-LNC107278119	LOC107278119	Intergenic	Chr1	11118683	11119334	+	Y/N
OSA-LNC4325787	LOC4325787	Intergenic	Chr1	11129396	11131870	+	Y/N
OSA-LNC107280369	LOC107280369	Antisense	Chr1	11528700	11531988	-	N/N
OSA-LNC112938747	LOC112938747	Antisense	Chr1	11609876	11611632	-	Y/N
OSA-LNC107281705	LOC107281705	Intergenic	Chr1	11875774	11877191	+	Y/N
OSA-LNC107281404	LOC107281404	Intergenic	Chr1	12150319	12151423	+	Y/N
OSA-LNC107281332	LOC107281332	Intergenic	Chr1	12301243	12302570	+	N/N
OSA-LNC107280183	LOC107280183	Antisense	Chr1	12500233	12503105	-	Y/N
OSA-LNC4326975	LOC4326975	Intergenic	Chr1	12627777	12630263	+	Y/N
OSA-LNC107281750	LOC107281750	Intergenic	Chr1	12661413	12666459	-	Y/N
OSA-LNC112938802	LOC112938802	Intronic (AS)	Chr1	12907139	12909375	-	Y/N
OSA-LNC112937699	LOC112937699	Intergenic	Chr1	13149270	13149967	-	N/N
OSA-LNC9270788	LOC9270788	Intergenic	Chr1	13198365	13199668	-	Y/N
OSA-LNC4326848	LOC4326848	Intergenic	Chr1	13265550	13268356	+	Y/N
OSA-LNC112939074	LOC112939074	Intergenic	Chr1	13270375	13272012	+	Y/N
OSA-LNC112938847	LOC112938847	Intergenic	Chr1	13461267	13461883	-	N/N
OSA-LNC9266164	LOC9266164	Antisense	Chr1	13508322	13508959	-	Y/N
OSA-LNC107280464	LOC107280464	Intergenic	Chr1	13593861	13598054	+	Y/N
OSA-LNC4326470	LOC4326470	Intergenic	Chr1	13899521	13900724	-	Y/N
OSA-LNC4326474	LOC4326474	Intergenic	Chr1	13934394	13936611	+	Y/N
OSA-LNC112938966	LOC112938966	Intergenic	Chr1	14085207	14086549	-	N/N
OSA-LNC112938967	LOC112938967	Intergenic	Chr1	14147567	14150713	-	Y/N
OSA-LNC4326275	LOC4326275	Intergenic	Chr1	14197285	14199514	+	Y/N
OSA-LNC107281736	LOC107281736	Intergenic	Chr1	14240406	14241517	+	N/N
OSA-LNC107279846	LOC107279846	Antisense	Chr1	14295541	14297886	+	Y/N
OSA-LNC107281710	LOC107281710	Intergenic	Chr1	14321062	14323329	-	Y/N
OSA-LNC107275343	LOC107275343	Intergenic	Chr1	14377090	14377957	-	N/N
OSA-LNC4326029	LOC4326029	Intergenic	Chr1	14702420	14703807	-	Y/N
OSA-LNC107281786	LOC107281786	Antisense	Chr1	14745972	14748507	+	Y/N
OSA-LNC107280213	LOC107280213	Intergenic	Chr1	14775714	14777987	-	Y/N
OSA-LNC9266820	LOC9266820	Intergenic	Chr1	14780948	14786489	-	Y/N
OSA-LNC9269059	LOC9269059	Intergenic	Chr1	14828465	14829247	-	Y/N
OSA-LNC9269648	LOC9269648	Intergenic	Chr1	14900622	14903064	+	Y/N
OSA-LNC112937651	LOC112937651	Intergenic	Chr1	14952050	14953229	+	Y/N
OSA-LNC4325725	LOC4325725	Intergenic	Chr1	14955698	14959974	+	Y/N
OSA-LNC4325703	LOC4325703	Intergenic	Chr1	15162375	15169311	+	Y/N
OSA-LNC107281098	LOC107281098	Intergenic	Chr1	15338074	15342641	+	Y/N
OSA-LNC107280746	LOC107280746	Intergenic	Chr1	15380236	15382747	+	Y/N
OSA-LNC107276984	LOC107276984	Intergenic	Chr1	15383013	15385741	-	N/N
OSA-LNC9269634	LOC9269634	Intergenic	Chr1	15541986	15543819	+	Y/N
OSA-LNC9270975	LOC9270975	Intergenic	Chr1	15759547	15763124	+	Y/N
OSA-LNC4325419	LOC4325419	Intergenic	Chr1	15845607	15847984	-	N/N
OSA-LNC112939039	LOC112939039	Intergenic	Chr1	15879379	15881058	-	Y/N
OSA-LNC112939042	LOC112939042	Intergenic	Chr1	15960359	15962263	-	Y/N
OSA-LNC112939047	LOC112939047	Intergenic	Chr1	16027301	16028024	-	N/N
OSA-LNC107280736	LOC107280736	Intergenic	Chr1	16028692	16030965	-	Y/N
OSA-LNC112939050	LOC112939050	Intergenic	Chr1	16103425	16104774	-	Y/N
OSA-LNC107279876	LOC107279876	Intergenic	Chr1	16201970	16205191	+	Y/N
OSA-LNC9270533	LOC9270533	Intergenic	Chr1	16232115	16234513	+	Y/N
OSA-LNC112939051	LOC112939051	Intergenic	Chr1	16279087	16280003	+	Y/N
OSA-LNC9266303	LOC9266303	Intergenic	Chr1	16296163	16300262	-	Y/N
OSA-LNC107278133	LOC107278133	Intergenic	Chr1	16315788	16318740	+	N/N
OSA-LNC4325223	LOC4325223	Intergenic	Chr1	16347015	16348893	-	Y/N
OSA-LNC4325233	LOC4325233	Intergenic	Chr1	16533619	16542505	-	Y/N
OSA-LNC9267988	LOC9267988	Intergenic	Chr1	16588803	16597630	+	Y/N
OSA-LNC107280761	LOC107280761	Intergenic	Chr1	16609750	16613727	-	Y/N
OSA-LNC107277807	LOC107277807	Intergenic	Chr1	16631075	16637328	-	Y/N
OSA-LNC112939082	LOC112939082	Antisense	Chr1	16695962	16705337	-	N/N
OSA-LNC9268740	LOC9268740	Intergenic	Chr1	16716638	16719376	+	Y/N
OSA-LNC9267435	LOC9267435	Intergenic	Chr1	17076620	17077574	-	Y/N
OSA-LNC4324545	LOC4324545	Intergenic	Chr1	17275532	17278335	-	Y/N
OSA-LNC107275663	LOC107275663	Intergenic	Chr1	17294007	17299766	-	Y/N
OSA-LNC107281700	LOC107281700	Intergenic	Chr1	17600255	17602247	+	Y/N
OSA-LNC112939232	LOC112939232	Intergenic	Chr1	17681377	17682888	+	Y/N
OSA-LNC4324052	LOC4324052	Intergenic	Chr1	17792155	17794513	+	Y/N
OSA-LNC4324020	LOC4324020	Intergenic	Chr1	17881774	17885735	-	Y/N
OSA-LNC107281351	LOC107281351	Intergenic	Chr1	17921777	17922899	-	Y/N
OSA-LNC107279855	LOC107279855	Intergenic	Chr1	17959120	17960672	+	Y/N
OSA-LNC107281399	LOC107281399	Intergenic	Chr1	18011860	18012693	+	N/N
OSA-LNC107279866	LOC107279866	Intergenic	Chr1	18021925	18026334	+	Y/N
OSA-LNC4324034	LOC4324034	Intergenic	Chr1	18026554	18029636	-	Y/N
OSA-LNC9270562	LOC9270562	Intergenic	Chr1	18035208	18036667	-	Y/N
OSA-LNC9271846	LOC9271846	Intergenic	Chr1	18130227	18132854	-	Y/N
OSA-LNC4323977	LOC4323977	Intergenic	Chr1	18446941	18448948	+	N/N
OSA-LNC4323980	LOC4323980	Intergenic	Chr1	18555670	18560266	+	Y/N
OSA-LNC9271859	LOC9271859	Intergenic	Chr1	18582297	18587847	+	Y/N
OSA-LNC112939270	LOC112939270	Intergenic	Chr1	18587542	18589778	-	Y/N
OSA-LNC9267014	LOC9267014	Intergenic	Chr1	18728198	18731113	-	Y/N
OSA-LNC112939281	LOC112939281	Overlapping (S)	Chr1	18822852	18828644	+	Y/N
OSA-LNC112939306	LOC112939306	Intergenic	Chr1	19097949	19104989	+	Y/N
OSA-LNC9269968	LOC9269968	Intergenic	Chr1	19106724	19107564	-	Y/N
OSA-LNC107278534	LOC107278534	Intergenic	Chr1	19229284	19231913	-	N/N
OSA-LNC112939323	LOC112939323	Intergenic	Chr1	19375559	19378722	+	Y/N
OSA-LNC112939652	LOC112939652	Intergenic	Chr1	19605004	19605970	+	N/N
OSA-LNC107281801	LOC107281801	Intergenic	Chr1	19627353	19627835	+	N/N
OSA-LNC4326424	LOC4326424	Intergenic	Chr1	19690210	19693504	+	Y/N
OSA-LNC107281791	LOC107281791	Intergenic	Chr1	19707934	19710529	-	Y/N
OSA-LNC112939331	LOC112939331	Intergenic	Chr1	19919083	19920108	-	Y/N
OSA-LNC112939333	LOC112939333	Intergenic	Chr1	19954647	19954973	+	Y/N
OSA-LNC4326873	LOC4326873	Intergenic	Chr1	20041600	20044750	+	Y/N
OSA-LNC112939573	LOC112939573	Intergenic	Chr1	20205123	20205969	-	Y/N
OSA-LNC107281467	LOC107281467	Intergenic	Chr1	20212002	20213558	-	Y/N
OSA-LNC9269411	LOC9269411	Intergenic	Chr1	20407293	20415063	-	Y/N
OSA-LNC112937658	LOC112937658	Intergenic	Chr1	20416271	20417375	+	Y/N
OSA-LNC4325852	LOC4325852	Intergenic	Chr1	20746726	20750490	-	Y/N
OSA-LNC112939589	LOC112939589	Intergenic	Chr1	20829712	20831699	-	N/N
OSA-LNC107278527	LOC107278527	Intergenic	Chr1	20868852	20873062	+	Y/N
OSA-LNC107279849	LOC107279849	Intergenic	Chr1	20952097	20953115	+	N/N
OSA-LNC9269541	LOC9269541	Intergenic	Chr1	21338111	21340948	-	Y/N
OSA-LNC9267960	LOC9267960	Intergenic	Chr1	21447484	21450116	-	Y/N
OSA-LNC9270518	LOC9270518	Intronic (AS)	Chr1	21534057	21537977	-	Y/N
OSA-LNC107281430	LOC107281430	Intergenic	Chr1	21888661	21889886	+	Y/N
OSA-LNC112939437	LOC112939437	Intergenic	Chr1	21945924	21947523	+	Y/N
OSA-LNC9270426	LOC9270426	Intergenic	Chr1	21956758	21963354	+	Y/N
OSA-LNC107281760	LOC107281760	Intergenic	Chr1	22010758	22012480	-	Y/N
OSA-LNC112939441	LOC112939441	Intergenic	Chr1	22032368	22034029	-	Y/N
OSA-LNC107277654	LOC107277654	Intergenic	Chr1	22185284	22186073	-	Y/N
OSA-LNC107281673	LOC107281673	Intergenic	Chr1	22198944	22199938	+	Y/N
OSA-LNC9272081	LOC9272081	Intronic (S)	Chr1	22221781	22222615	+	Y/N
OSA-LNC112939649	LOC112939649	Intergenic	Chr1	22388335	22389348	-	N/N