Chr:
Chr1
Start:
11012203
End:
11013811
Strand:
+
Ref_name:
LOC112938726
Sequence
(XR_003241965.1):
UCUUGCCACACAAUUAUGUUACUGUUGCACUGUUCAUGCGCUUCCUGGUCGUCCGAUGCGCUAGGUCUUUUGCCUGCUAAUUCCCCAUCGUUCUUUCCCGUCCUUGUAGAACCACGCCGCCGGUGGUUGCCAUACGCCCGCACCAUCAUCUGCUCGCUAGAGGACAAUAGGAAAUCCAUGUCGCCGCCGCCUUGGUCGCCGUCGAUGUAAAUCUCGGCUCGCCACCGUCUCCUCUGUCGCCGCCGAUUCUAAAGCUCAGGACGCCGCCGGCGCCACCACCACCGCUACCGCUGGCGCUGUCGUUCUGAGGUUGGUUCACCAUCACCGCUCGAGACUCCUCCCUCACUCAUCAAAGCCUCUCAAAGUUGCGUUGCCGCCUGCAGCUCGCUGGACGAUUAUACGAUGAGCCACCAGGCCCCAAGCACCUCAAGCCCUGGCCGGAGCGUCUAAUCGAUAGAAACUGCCGUGAUGGCCUGCUGCUACCAGCAUUCAUAGGCUGACAUCAAGAUCGUCUAGGUUGCCUGCUUCUCUUUUGCUUGGGCUAAUGCUGGUGUUCACCAAGUUUGCAUUUAGUAAACCAUAUUUUGUUUAGUGCUUGCAUUUUCUACAUGACAUCAAGCAGAAAUUUAGGCCUACUAAGCUCGAGGACUACAUUAGGUAAAAGUUUGGAAGAGAAUCGAAUUAUUACAGGUCAGAAAUUGAUAUUUGGACUGCACCUAAGCUUAUGAGAUAGAAAAUUAUCUGUGCCUGUUGUUUUUCUGUAUCUCAUAUGAAAUGUAGCUCAAACCUUUUUUACGUGCUUUCACCAUUGCUUUGACACUAGGAAUGAGGUUUGAAUUUGGGAAUGUUUUUUUUUGCUUCAUUUAAUGAGAAAUCAGAAAUUGAUAUUUGGACUGCACCUAAAGUUAUGAGAUAGAAAAUUAUUUGUGCUUAUUGUUUUUCAGCAUCUCAUAUGAAAUGCAACUCAAACCUUUUUUAUGUGCUUUCACCAUUGCUCUAACAUUAGGAAUGAGGUUUGAAUUUGGGAAUGCUUUUUUGUUGCUUUAUUUAAUGAGGAUUCAAAUAUUCCCACCUCCUAAUUAGCGAAUAAGAAAACUAAAGAUAUAAUUUCCUAUUCUACAUUGACAAUGCAAGAAACUCACCAAUUGGAAUGAAUUUAGACGUCAAUGACCUGAUAGAUUAUUUUCUUAAACUAUUUAGAUCAGACUAACAAUAAGAGUUUUACAUAAGUGAACAUGGUGUGGAUAUAGAACAUCCAAUGUAGUGUCAGAGGAUCAUUUCCAUCCAAUGAUUAUGUCCUCUUUUUUUCCACCCGAAAUGUCCUACCAAUAGAUUGCACAUGUAAUUAUUGUUCCUAUUAGCUUCUAUUACUCAGGUUUUGUGGGCUGCUCCUCUUCAUGACUUCCCUUCCUUGCUAUCUCUUCGGAUAUUCAUAUUUCGUUUACACCCAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
81.71%
ME_num:
MEP:
18.09%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.89
Avg Expression:
1.13
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 2.806942397995 | 0.00265371503921252 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 2.73403681778418 | 0.0146066642206179 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 2.35883062816266 | 0.0360306784669874 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | 2.51682192122199 | 0.0214272170076178 |
| 5 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -4.51960676476291 | 0.00901410367402267 |