Chr:
Chr1
Start:
22010758
End:
22012480
Strand:
-
Ref_name:
LOC107281760
Sequence
(XR_001547602.2):
UCGAGAGCCUCUACAACCCUAGCCGCCACCGCUACUGCGCCCUUGUCGCCGCUGCUAUUAUCCCUGUCGCCGCCACCACAGCCGUGGCCGGCCAUCGUCAUCCGUCGCCACCGGUGAUCCCUUUCUGUUUUUUUCCUUCCCGAGGGGAGAAGGUUCAGAGGGCAGAGGAAGAAGGAGGAUUAAAGAAGAAAAAGAGAAAGAGAAGCAAAGUUGGGGAUUUUCUGGGAUUCCACAAAUUCACCUCAAAUUUGAUUUUCUCCUCUAUAAGGGUGUGGAGAGAUCUGGUGUGGAGGGGGUUUCGUCGGGUUGCCGUCGAGGUUAAAGGCAAGUGUAUGACGAACAAAUUAUGUGUUUCUUGGAUUGUUUGCUCCACCUAUUUAUUUUCAAUAUAUUUCUAUGUUAUAUGUGAUUGCAUAUGUUCAGAUUAUUGUUCAUGAUAUUUAUAUUUCAGGUUUAUCUUAUGUUCACAAUGACGUUAUUCUUGUUUCAAUAUUCUGGAUUCUGGUUCUGGUUAAAUAACUCAAUUUCCAUGCUUGCCAUGGAUGUGCAAUUUAGUUUCAAUUUGCUUUUUUGUUUCUAGUUUCAAUUAUUCAUGUUCCAUGUGAGUCAUGGAUAUGCUAUCUGGUUUUAUAUUCAUGUUCCUAUAGGUAAUUGUUGAUCAAGCUUACUCGGCUUUGCCGGCAAAUGCUAGGAUGUAUUCACAGUUGUCCAGGAUGGGAACUACUAUUUCAAUUCAUGUCUGUUCGGGAUGGGAACUAUUAAUUUUCUUUAACAUGGUGUUUGAAACCGUGUUUCUUUUCAAAGAAAGAAAGUUUUAUGUUCAGGCUUUAUUGCCAAUGAUGUGUAUAUGUGUUUUCUAGUUCCAUAUUGUACUUGCUAAGUAUUUAUGUACUCACUCUUGUGUUUAUUUGGUUUUAAGUACACAUUGAGAUCAGUAUGUAUGGGCGGAAAGUAGCACCCUUAUAUACACAUCUAUCUACACACUAUCAAAUUAUAUUGCUUAGGUCCAUAAUGACACUUAAACUAUAUCCUGGUUUUGUCUUGUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
89.02%
ME_num:
MEP:
10.77%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.82
Avg Expression:
0.59
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf // 48_hrs_after_mock_inoculation--/--Nipponbare // leaf // 48_hrs_after_inoculation_with_BLS256 | 4.46619646953753 | 0.0117783938755444 |
| 2 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | -4.47434027228051 | 0.0467408542456387 |
| 3 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // gibberellic acid (GA) | -4.19772096410974 | 0.0435385307347229 |