RiceNCexp:Browse

LncRNA Genes Basic Information

We obtained 7898 novel rice lncRNAs based on transcript assembly. The names of these novel lncRNAs are prefixed with "OSA-LNCN".

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 11014

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Warning: Undefined variable $TSE in /home/www/html/RiceNCexp/browse.php on line 547

Name	Ref_name	Classification	Chromosome	Start	End	Strand	DE/TSE
OSA-LNC112939552	LOC112939552	Intergenic	Chr1	22639587	22640803	+	N/
OSA-LNC107281802	LOC107281802	Intergenic	Chr1	22803756	22804434	-	N/N
OSA-LNC107281776	LOC107281776	Intergenic	Chr1	23416370	23418688	-	N/N
OSA-LNC112939611	LOC112939611	Intergenic	Chr1	23423674	23424766	-	Y/N
OSA-LNC112939609	LOC112939609	Antisense	Chr1	23431377	23438115	-	Y/N
OSA-LNC107277984	LOC107277984	Intergenic	Chr1	23541696	23544382	-	Y/N
OSA-LNC112939629	LOC112939629	Antisense	Chr1	23782622	23783506	-	Y/N
OSA-LNC107280488	LOC107280488	Intergenic	Chr1	23918174	23918954	-	Y/N
OSA-LNC9267101	LOC9267101	Intergenic	Chr1	24046279	24047094	+	Y/N
OSA-LNC4325313	LOC4325313	Intergenic	Chr1	24195448	24196562	+	Y/N
OSA-LNC112939657	LOC112939657	Overlapping (AS)	Chr1	24271881	24282232	-	Y/N
OSA-LNC9269181	LOC9269181	Intergenic	Chr1	24390672	24391814	-	Y/N
OSA-LNC4326646	LOC4326646	Intergenic	Chr1	24392783	24393529	+	Y/N
OSA-LNC4326691	LOC4326691	Intergenic	Chr1	25019165	25021627	-	Y/N
OSA-LNC112939706	LOC112939706	Intergenic	Chr1	25126551	25127470	+	Y/N
OSA-LNC112937662	LOC112937662	Intergenic	Chr1	25140468	25141621	+	Y/N
OSA-LNC112939714	LOC112939714	Intergenic	Chr1	25203147	25212472	+	Y/N
OSA-LNC112939717	LOC112939717	Intergenic	Chr1	25219649	25221532	+	Y/N
OSA-LNC107278480	LOC107278480	Intergenic	Chr1	25324425	25327079	-	Y/N
OSA-LNC107280517	LOC107280517	Intergenic	Chr1	25547856	25548893	-	Y/N
OSA-LNC112939837	LOC112939837	Intergenic	Chr1	25549034	25553918	+	Y/N
OSA-LNC112939839	LOC112939839	Intergenic	Chr1	25564964	25565879	-	Y/N
OSA-LNC107279157	LOC107279157	Antisense	Chr1	25579001	25583719	-	Y/N
OSA-LNC107281463	LOC107281463	Intergenic	Chr1	25818080	25818889	+	Y/N
OSA-LNC112939862	LOC112939862	Intergenic	Chr1	25933185	25934898	-	Y/N
OSA-LNC9267098	LOC9267098	Intergenic	Chr1	26051744	26053762	+	Y/N
OSA-LNC112937663	LOC112937663	Intergenic	Chr1	26424727	26426404	-	N/N
OSA-LNC107279900	LOC107279900	Intergenic	Chr1	27033801	27035786	-	Y/N
OSA-LNC112939912	LOC112939912	Antisense	Chr1	27041791	27042641	-	Y/N
OSA-LNC107280768	LOC107280768	Intergenic	Chr1	27061368	27066085	+	Y/N
OSA-LNC107278186	LOC107278186	Intergenic	Chr1	27062498	27064326	-	Y/N
OSA-LNC107281544	LOC107281544	Intergenic	Chr1	27400124	27401765	+	N/N
OSA-LNC107280440	LOC107280440	Intergenic	Chr1	27405774	27407342	+	N/N
OSA-LNC112936162	LOC112936162	Intergenic	Chr1	27431067	27435271	-	Y/N
OSA-LNC112936165	LOC112936165	Intergenic	Chr1	27495518	27496240	+	Y/N
OSA-LNC107281676	LOC107281676	Intergenic	Chr1	27540684	27543231	+	Y/N
OSA-LNC9272505	LOC9272505	Intergenic	Chr1	27703739	27705101	+	Y/N
OSA-LNC107279110	LOC107279110	Intergenic	Chr1	27866473	27867918	-	N/N
OSA-LNC112936219	LOC112936219	Intergenic	Chr1	27955116	27955787	-	N/N
OSA-LNC107277089	LOC107277089	Intronic (S)	Chr1	28179589	28181837	+	N/N
OSA-LNC112936304	LOC112936304	Intronic (AS)	Chr1	28183111	28186675	-	Y/N
OSA-LNC4324108	LOC4324108	Intergenic	Chr1	28296785	28300005	+	Y/N
OSA-LNC107279858	LOC107279858	Intergenic	Chr1	28602918	28604446	+	Y/N
OSA-LNC9271656	LOC9271656	Intergenic	Chr1	28823306	28824239	-	Y/N
OSA-LNC107279517	LOC107279517	Antisense	Chr1	28830356	28833251	-	Y/N
OSA-LNC112936407	LOC112936407	Intergenic	Chr1	28900146	28904108	-	Y/N
OSA-LNC112937665	LOC112937665	Intergenic	Chr1	28962677	28964409	+	Y/N
OSA-LNC4324252	LOC4324252	Intergenic	Chr1	29206361	29209618	-	Y/N
OSA-LNC107281401	LOC107281401	Intergenic	Chr1	29213331	29214409	-	Y/N
OSA-LNC107281734	LOC107281734	Intergenic	Chr1	29254388	29255499	+	N/N
OSA-LNC107281738	LOC107281738	Intergenic	Chr1	29259569	29260680	+	N/N
OSA-LNC107279867	LOC107279867	Antisense	Chr1	29319471	29321474	+	Y/N
OSA-LNC107277875	LOC107277875	Intergenic	Chr1	29521594	29523287	-	Y/N
OSA-LNC107281398	LOC107281398	Intergenic	Chr1	29711806	29717504	-	N/N
OSA-LNC9271943	LOC9271943	Intergenic	Chr1	29971388	29972150	+	Y/N
OSA-LNC107281787	LOC107281787	Intergenic	Chr1	30201116	30204456	-	N/N
OSA-LNC4324729	LOC4324729	Intergenic	Chr1	30270925	30272789	+	Y/N
OSA-LNC4323922	LOC4323922	Intergenic	Chr1	30380195	30383369	+	Y/N
OSA-LNC112936607	LOC112936607	Antisense	Chr1	30397233	30398878	-	Y/N
OSA-LNC107279228	LOC107279228	Intronic (AS)	Chr1	30401495	30403080	-	Y/N
OSA-LNC107279857	LOC107279857	Intronic (AS)	Chr1	30627305	30629974	-	Y/N
OSA-LNC112936635	LOC112936635	Intergenic	Chr1	30634932	30638577	-	Y/N
OSA-LNC107280496	LOC107280496	Intergenic	Chr1	30960477	30962497	-	Y/N
OSA-LNC4326173	LOC4326173	Intergenic	Chr1	31165664	31168775	+	Y/N
OSA-LNC112936806	LOC112936806	Intergenic	Chr1	31705131	31706532	+	Y/N
OSA-LNC4327148	LOC4327148	Overlapping (AS)	Chr1	32692285	32698324	-	N/N
OSA-LNC9268283	LOC9268283	Intergenic	Chr1	32934177	32935007	+	Y/N
OSA-LNC107279769	LOC107279769	Intergenic	Chr1	33241622	33244557	-	Y/N
OSA-LNC112939355	LOC112939355	Intergenic	Chr1	33336929	33338545	-	N/N
OSA-LNC4325623	LOC4325623	Antisense	Chr1	33660189	33663073	-	Y/N
OSA-LNC107279860	LOC107279860	Intergenic	Chr1	33663912	33665355	-	Y/N
OSA-LNC107279871	LOC107279871	Antisense	Chr1	33671947	33674914	-	Y/N
OSA-LNC107280209	LOC107280209	Antisense	Chr1	33683989	33688602	-	Y/N
OSA-LNC4325627	LOC4325627	Antisense	Chr1	33691778	33696906	-	Y/N
OSA-LNC107281485	LOC107281485	Intergenic	Chr1	33911049	33911994	+	N/N
OSA-LNC4327553	LOC4327553	Intergenic	Chr1	34192690	34194028	+	Y/N
OSA-LNC112937376	LOC112937376	Antisense	Chr1	34427846	34434344	+	Y/N
OSA-LNC9270860	LOC9270860	Antisense	Chr1	34445308	34452607	+	N/N
OSA-LNC107278386	LOC107278386	Intergenic	Chr1	34458160	34464072	+	Y/N
OSA-LNC107279868	LOC107279868	Intergenic	Chr1	34495709	34498501	-	Y/N
OSA-LNC9267804	LOC9267804	Antisense	Chr1	34737232	34746474	-	Y/N
OSA-LNC4327444	LOC4327444	Intergenic	Chr1	34882322	34884557	-	Y/N
OSA-LNC107281302	LOC107281302	Intergenic	Chr1	35110844	35111309	-	Y/N
OSA-LNC9270749	LOC9270749	Intergenic	Chr1	35203828	35205667	-	Y/N
OSA-LNC112937451	LOC112937451	Antisense	Chr1	35328725	35329330	-	N/N
OSA-LNC9271335	LOC9271335	Intergenic	Chr1	35488706	35489855	-	Y/N
OSA-LNC9272196	LOC9272196	Antisense	Chr1	35743195	35749647	-	Y/N
OSA-LNC112937591	LOC112937591	Overlapping (AS)	Chr1	35780250	35796797	+	Y/N
OSA-LNC112937593	LOC112937593	Antisense	Chr1	35902498	35903044	-	Y/N
OSA-LNC9271243	LOC9271243	Intergenic	Chr1	35957123	35959064	-	Y/N
OSA-LNC107280150	LOC107280150	Intergenic	Chr1	35958983	35959616	+	Y/N
OSA-LNC9271642	LOC9271642	Intergenic	Chr1	35972770	35976068	+	Y/N
OSA-LNC112937595	LOC112937595	Intergenic	Chr1	36307506	36311228	-	Y/N
OSA-LNC107279847	LOC107279847	Intergenic	Chr1	36325425	36326115	-	Y/N
OSA-LNC107281685	LOC107281685	Intergenic	Chr1	36498432	36500625	+	Y/N
OSA-LNC112937597	LOC112937597	Intergenic	Chr1	36501222	36504654	+	Y/N
OSA-LNC107279844	LOC107279844	Antisense	Chr1	36684314	36685135	+	Y/N
OSA-LNC112937599	LOC112937599	Intergenic	Chr1	36729634	36730638	+	N/N
OSA-LNC112937600	LOC112937600	Intergenic	Chr1	36772733	36775784	+	Y/N
OSA-LNC107281511	LOC107281511	Intergenic	Chr1	36833358	36836022	-	N/N
OSA-LNC112937601	LOC112937601	Intergenic	Chr1	36890904	36892441	-	Y/N
OSA-LNC107277998	LOC107277998	Intergenic	Chr1	37247841	37249752	+	Y/N
OSA-LNC112939335	LOC112939335	Intergenic	Chr1	37338743	37339707	+	N/N
OSA-LNC112937602	LOC112937602	Intergenic	Chr1	37694985	37696646	-	Y/N
OSA-LNC107279862	LOC107279862	Intergenic	Chr1	38035876	38038448	-	Y/N
OSA-LNC112937605	LOC112937605	Intergenic	Chr1	38045090	38047850	-	Y/N
OSA-LNC107279852	LOC107279852	Antisense	Chr1	38048621	38051400	-	Y/N
OSA-LNC4325088	LOC4325088	Antisense	Chr1	38082335	38088769	-	Y/N
OSA-LNC9270063	LOC9270063	Intergenic	Chr1	38218058	38218720	+	Y/N
OSA-LNC107278952	LOC107278952	Intergenic	Chr1	38279150	38281930	+	Y/N
OSA-LNC112937606	LOC112937606	Antisense	Chr1	38438239	38438811	+	Y/N
OSA-LNC112939342	LOC112939342	Intergenic	Chr1	38563210	38563819	-	Y/N
OSA-LNC112937610	LOC112937610	Antisense	Chr1	39235650	39238886	+	Y/N
OSA-LNC4325011	LOC4325011	Antisense	Chr1	39275195	39283022	+	Y/N
OSA-LNC112937612	LOC112937612	Intergenic	Chr1	39397360	39401050	-	Y/N
OSA-LNC9270646	LOC9270646	Intergenic	Chr1	39465023	39466173	-	Y/N
OSA-LNC112937613	LOC112937613	Intronic (AS)	Chr1	39617146	39620027	+	Y/N
OSA-LNC9266385	LOC9266385	Intergenic	Chr1	39636941	39640872	+	N/N
OSA-LNC107280140	LOC107280140	Intergenic	Chr1	39641024	39642942	+	N/N
OSA-LNC4324869	LOC4324869	Intergenic	Chr1	39654612	39658040	-	Y/N
OSA-LNC9271067	LOC9271067	Intergenic	Chr1	39658258	39660010	+	Y/N
OSA-LNC107276968	LOC107276968	Intergenic	Chr1	39862031	39864002	+	Y/N
OSA-LNC112937616	LOC112937616	Intergenic	Chr1	39978701	39980338	-	Y/N
OSA-LNC107281755	LOC107281755	Intergenic	Chr1	40264940	40271003	-	Y/N
OSA-LNC107278895	LOC107278895	Antisense	Chr1	40333626	40334556	-	Y/N
OSA-LNC107278893	LOC107278893	Intergenic	Chr1	40336727	40339810	-	Y/N
OSA-LNC112937617	LOC112937617	Antisense	Chr1	40364009	40366609	-	Y/N
OSA-LNC107280201	LOC107280201	Intergenic	Chr1	40381017	40384157	-	Y/N
OSA-LNC9267008	LOC9267008	Intergenic	Chr1	40390397	40393137	+	Y/N
OSA-LNC107279879	LOC107279879	Intergenic	Chr1	40619673	40622109	+	Y/N
OSA-LNC107280313	LOC107280313	Antisense	Chr1	40663607	40664017	-	N/N
OSA-LNC107278319	LOC107278319	Intergenic	Chr1	40799432	40800307	+	Y/N
OSA-LNC112937621	LOC112937621	Intergenic	Chr1	40817835	40819845	+	Y/N
OSA-LNC9268338	LOC9268338	Intergenic	Chr1	40909705	40914202	-	N/N
OSA-LNC4326824	LOC4326824	Intergenic	Chr1	40932511	40950507	+	Y/N
OSA-LNC4326825	LOC4326825	Intergenic	Chr1	40937875	40941050	-	Y/N
OSA-LNC4326785	LOC4326785	Antisense	Chr1	40999182	41005254	+	Y/N
OSA-LNC9272650	LOC9272650	Overlapping (AS)	Chr1	41110034	41111860	+	Y/N
OSA-LNC9271510	LOC9271510	Antisense	Chr1	41116400	41117520	+	Y/N
OSA-LNC112937624	LOC112937624	Intergenic	Chr1	41164258	41165355	-	Y/N
OSA-LNC4326056	LOC4326056	Intergenic	Chr1	41450287	41452568	+	Y/N
OSA-LNC107280423	LOC107280423	Intergenic	Chr1	41454568	41456902	-	Y/N
OSA-LNC107276921	LOC107276921	Intergenic	Chr1	41481260	41483541	+	N/N
OSA-LNC4326059	LOC4326059	Antisense	Chr1	41485541	41494445	-	Y/N
OSA-LNC112937627	LOC112937627	Intergenic	Chr1	41560020	41563735	+	Y/N
OSA-LNC112937628	LOC112937628	Intergenic	Chr1	41624747	41628424	-	N/N
OSA-LNC107279881	LOC107279881	Intergenic	Chr1	41800235	41802159	-	N/N
OSA-LNC107281494	LOC107281494	Intergenic	Chr1	41805416	41806771	-	N/N
OSA-LNC112937629	LOC112937629	Intergenic	Chr1	42133602	42136392	+	Y/N
OSA-LNC112937631	LOC112937631	Antisense	Chr1	42349555	42351328	+	Y/N
OSA-LNC9269867	LOC9269867	Intergenic	Chr1	42403859	42408113	+	Y/N
OSA-LNC107279883	LOC107279883	Intergenic	Chr1	42472568	42479615	+	Y/N
OSA-LNC9266912	LOC9266912	Antisense	Chr1	42662944	42671953	-	Y/N
OSA-LNC107280163	LOC107280163	Intergenic	Chr1	42678818	42681927	+	Y/N
OSA-LNC107281195	LOC107281195	Antisense	Chr1	42771570	42772687	-	N/N
OSA-LNC107281162	LOC107281162	Intergenic	Chr1	43106306	43108541	+	Y/N
OSA-LNC112937921	LOC112937921	Antisense	Chr2	85342	96573	+	N/N
OSA-LNC9269638	LOC9269638	Intergenic	Chr2	152799	156042	+	Y/N
OSA-LNC112937896	LOC112937896	Overlapping (AS)	Chr2	467484	473100	+	N/N
OSA-LNC107280088	LOC107280088	Intergenic	Chr2	493565	494405	-	Y/N
OSA-LNC107277795	LOC107277795	Intergenic	Chr2	596401	597199	+	Y/N
OSA-LNC107280108	LOC107280108	Intergenic	Chr2	616196	617567	-	Y/N
OSA-LNC112937964	LOC112937964	Intergenic	Chr2	797793	815232	-	Y/N
OSA-LNC107280072	LOC107280072	Intergenic	Chr2	1369763	1373733	+	Y/N
OSA-LNC107280162	LOC107280162	Intergenic	Chr2	1548235	1550427	+	Y/N
OSA-LNC112937925	LOC112937925	Intergenic	Chr2	1549893	1553381	-	N/N
OSA-LNC107280121	LOC107280121	Antisense	Chr2	1615473	1619113	-	Y/N
OSA-LNC112937852	LOC112937852	Intergenic	Chr2	1722835	1724464	-	N/N
OSA-LNC9269125	LOC9269125	Intergenic	Chr2	1928611	1929620	+	Y/N
OSA-LNC112938001	LOC112938001	Intergenic	Chr2	1930025	1930859	-	Y/N
OSA-LNC107279940	LOC107279940	Intergenic	Chr2	1936759	1939181	-	Y/N
OSA-LNC112937927	LOC112937927	Antisense	Chr2	1973853	1974280	+	Y/N
OSA-LNC107278305	LOC107278305	Intronic (S)	Chr2	2371907	2375282	+	Y/N
OSA-LNC9267220	LOC9267220	Intergenic	Chr2	2447878	2451118	-	Y/N
OSA-LNC112938009	LOC112938009	Intergenic	Chr2	2672746	2673779	+	N/N
OSA-LNC9272718	LOC9272718	Intergenic	Chr2	2674434	2676653	-	Y/N
OSA-LNC112937894	LOC112937894	Intergenic	Chr2	2690448	2693734	-	Y/N
OSA-LNC112937930	LOC112937930	Intergenic	Chr2	2765240	2765875	+	Y/N
OSA-LNC9267540	LOC9267540	Intergenic	Chr2	2850243	2862109	-	Y/N
OSA-LNC112937931	LOC112937931	Intergenic	Chr2	2874198	2874942	-	Y/N
OSA-LNC107280152	LOC107280152	Intergenic	Chr2	2940953	2942780	+	Y/N
OSA-LNC112937933	LOC112937933	Antisense	Chr2	2951599	2959142	+	Y/N
OSA-LNC112937932	LOC112937932	Antisense	Chr2	2961890	2963494	+	Y/N
OSA-LNC107280128	LOC107280128	Intergenic	Chr2	2964514	2969428	+	Y/N
OSA-LNC112937934	LOC112937934	Overlapping (AS)	Chr2	2970596	2977282	+	Y/N
OSA-LNC107277908	LOC107277908	Antisense	Chr2	2978149	2985409	+	Y/N
OSA-LNC112937937	LOC112937937	Intronic (AS)	Chr2	3004782	3006176	+	Y/N
OSA-LNC112937939	LOC112937939	Intergenic	Chr2	3064831	3065563	+	Y/N
OSA-LNC4328352	LOC4328352	Antisense	Chr2	3091706	3095359	+	Y/N
OSA-LNC112937938	LOC112937938	Intergenic	Chr2	3102037	3103187	+	Y/N
OSA-LNC107280039	LOC107280039	Intergenic	Chr2	3105274	3106493	+	N/N
OSA-LNC9267475	LOC9267475	Intergenic	Chr2	3271374	3272633	-	Y/N
OSA-LNC4328409	LOC4328409	Antisense	Chr2	3508442	3512286	-	N/N
OSA-LNC112937884	LOC112937884	Intergenic	Chr2	3544028	3545442	+	Y/N
OSA-LNC107279924	LOC107279924	Intergenic	Chr2	3547036	3551463	+	Y/N
OSA-LNC4328413	LOC4328413	Intergenic	Chr2	3557454	3560656	+	Y/N
OSA-LNC107280198	LOC107280198	Intergenic	Chr2	3579791	3581839	+	Y/N
OSA-LNC112937971	LOC112937971	Intergenic	Chr2	3763235	3768537	+	Y/N
OSA-LNC107280111	LOC107280111	Intergenic	Chr2	3843458	3844076	+	Y/N
OSA-LNC112937803	LOC112937803	Intergenic	Chr2	3874540	3875122	+	N/N