Chr:
Chr1
Start:
25564964
End:
25565879
Strand:
-
Ref_name:
LOC112939839
Sequence
(XR_003243684.1):
UUCCUGUUUUUACUUACAGUGCCAGCAAUUUGCCUCCCUCAUCAGGGCCACAUCUACAUGUGGAGUUCAUCUCCCAUAAAAGAGGAUGCACAUAGUAUACCUCACACAUGAACUCUGUAAUAAGCUAUGGUGAUCUUUAUAUGCUUCACCAACUGGUGACCAAUGGGCUCUUUUCUGAGAAAAUAGCCCAGUUUCCUCUUAAUUUUGUUAAUUCUGCACCUUGGUGCUCGUGAAGUAAGAGCACUAAGUUCAGAUGAUGAAGCACUUCUUGCUUUCAAGAAGGCAGUUACAACUUCUGAUGGGAUAUUCCUCAACUGGCGUGAACAAGAUGUGGAUCCUUGCAAUUGGAAGGAUGUUAGAUGUGACAGUCACACCAAGAGAGUAAUUUAUCUCUCAAGGCAAGGAGAGGCAGUGUCUCAUGGGAAUCAGGGGUAAGGGUAAGCCACCGUGCCAAAGAUUAUUCAAUUUGAGAGAGAAUACAUAUACCUUGCACCUGUACACUUGAGAUAUAUAGCAUAGUAGCAACUCUUGAUCAACAACCAAGUUUUUGUUUCCUUUCGUCUUUUACUCGGGAUGAGUAAAGGUUCAAGCUUGGGGGGUUUUGUUGACGGUCGUUAGCAAACAGUUUCGACCGCCAAUACUAUCAAAAUAAAGAAGAACAAGUUAUGCUUGCAAUGCAUAUUUGUGUUAGAAUAAUAAAUAUUCCACUAGUUAUAGGAUUACUAACCUCUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
59.35%
ME_num:
MEP:
17.48%
HE_num:
HEP:
22.97%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
carpel
Tau :
0.91
Avg Expression:
18.34
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 8.89879611858026 | 7.63304086898976e-10 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 7.76934587828769 | 3.69914782988115e-06 |