Chr:
Chr1
Start:
28602918
End:
28604446
Strand:
+
Ref_name:
LOC107279858
Sequence
(XR_001542479.2):
UCGCGCACUUCAUCCAUCGUCGUGCUGGUUUUUCAUCCGAUUUUAUUUCAGUUUCAUGCGACCGACUUCGUCUCGUCUCGCAUCGCAUCGCGCCGUCCGUCAAACAGAAGUGAACGAGUCCGCAUAGAUCGUGUGUGGUCCCACUCGCACCAAUCCUGUUCUAUUACGAUUUGCUCCAUGGCUGGCGAUUCGAUCGCCUGCAUGGCUGCAUGGCUGCAUCGCCUGACAUAGCGGGAGACAGGUUAAUCCACGCGCCACCGCCCGUCACGAGCCACGCCGCUGCCGCUGCCGCCUGGGAGAAUCGGGUUUCCGCGCUCGCCGCUGGAAGCUGCCGGCAACGGGCUCCAUCCCGCUAUGACGGUUCAAUUCCAUUCCCUCACCGCAACUGCCCGGGGAGGAUGCAACCCGCGUCACCUGCGGCGAGUUUCUCUGACCCAGCCGAUUCCGUCUAAAAUUAAUCAGAAAGUGAGUAGCCUCAUCCUACUAUACUACUACCCAUCCUCCGCCUGAUUUCUCUUAUGGAAGGGGAACCUACUACCGAUCUCACAUUCACAUAUUUGUGAUUGAUUGGUCGAGCGUGGAGAUGGCAGCCGGGAGCCCGGGAAUGAUAGCACGGGACGACCUUCACUUAUAAUCAUAUAGCGGUUCGAAAUGUGUGGGCGAAUCAAAGAAAUAUGUGGUCAGGGUCAGGGACGACAGUUCUGUGUGGGGGAGAAAAGCCGAUGAUGGAUUGAGACAUCCCUCUUCAAGCUGAGGAGUGAUUCCUCAAGUAUGCUAUAAUCAACCUCCUAUUUCAAUCUAUUCAGAGACAGGAGGAACUGUGCUGCUCCGAACUAUUCUGCUCAUGAUCCUACGAAAAGGUGCGGACUUGUUAGCCUGCCUUGAGAAGGUUCAGCACAUUAAGCCUCCACAAGUCAAACCACACGAUAAGCUCCUAUGAUUUGUUAACAUCCAGAUUCCCCACCUAUCAUGUCAUUGUGCUGUACAUCAAAAAUCUCGGAGUACAUAGACAAGGGGGUUUCAUAGCAUUUCAAGGAGCCUAUUAUGGCCUUCCAAGGGGGAAAAAAAGAUUUAUGUAUCUGACUGCGAAAGAAAGUGAGAAGGUGAAAAGGUUGCAUCAGAAUCAACAAUCACUUAGACAGGUUAAAAAUCAUGACAAAUCUAUAUUAGCUUUUUCCGUUGUAACUUGCGGGCAUUGUCUUUAGUAGUUCUCUCCGUUGCAACUCACAGGCAUUUUGCUAGUUAAAAAAAGAAAACAAAGCAAUAUCAUUUUUGCAUCAAAUACUUGAUAUCCAUGCAAAUUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
91.06%
ME_num:
MEP:
8.74%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.97
Avg Expression:
1.25
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 4.24602375398742 | 0.0162123223120483 |