RiceNCexp:Browse

LncRNA Genes Basic Information

We obtained 7898 novel rice lncRNAs based on transcript assembly. The names of these novel lncRNAs are prefixed with "OSA-LNCN".

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 11014

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Name	Ref_name	Classification	Chromosome	Start	End	Strand	DE/TSE
OSA-LNC112939716	LOC112939716	Antisense	Chr1	38317	39565	-	N/N
OSA-LNC107281753	LOC107281753	Intergenic	Chr1	101576	102684	-	N/N
OSA-LNC112936174	LOC112936174	Antisense	Chr1	163111	169478	+	Y/N
OSA-LNC107279520	LOC107279520	Antisense	Chr1	171000	172079	+	Y/N
OSA-LNC107280189	LOC107280189	Antisense	Chr1	303330	306444	-	Y/N
OSA-LNC107280387	LOC107280387	Intergenic	Chr1	403666	404719	-	Y/N
OSA-LNC107280385	LOC107280385	Intergenic	Chr1	404877	405848	+	Y/N
OSA-LNC112936901	LOC112936901	Antisense	Chr1	537031	538361	-	Y/N
OSA-LNC107279864	LOC107279864	Antisense	Chr1	596068	596997	-	Y/N
OSA-LNC107281806	LOC107281806	Intergenic	Chr1	664497	664851	+	N/N
OSA-LNC107278096	LOC107278096	Intergenic	Chr1	685838	686818	+	Y/N
OSA-LNC107278804	LOC107278804	Intergenic	Chr1	715622	719437	-	Y/N
OSA-LNC112937438	LOC112937438	Antisense	Chr1	719613	722857	+	Y/N
OSA-LNC107278390	LOC107278390	Antisense	Chr1	748764	749578	-	Y/N
OSA-LNC107282088	LOC107282088	Intergenic	Chr1	781183	785596	-	Y/N
OSA-LNC4326111	LOC4326111	Overlapping (AS)	Chr1	792460	796511	-	Y/N
OSA-LNC9271150	LOC9271150	Intergenic	Chr1	804083	809495	-	N/N
OSA-LNC4326113	LOC4326113	Intergenic	Chr1	808993	810958	+	Y/N
OSA-LNC107279476	LOC107279476	Antisense	Chr1	848376	857425	+	Y/N
OSA-LNC107281768	LOC107281768	Antisense	Chr1	915911	920716	-	Y/N
OSA-LNC107281770	LOC107281770	Intergenic	Chr1	927756	929216	-	Y/N
OSA-LNC107281771	LOC107281771	Antisense	Chr1	954966	957322	-	Y/N
OSA-LNC4326032	LOC4326032	Antisense	Chr1	1126507	1127402	-	Y/N
OSA-LNC107279845	LOC107279845	Intergenic	Chr1	1596475	1597634	-	Y/N
OSA-LNC112937711	LOC112937711	Intronic (AS)	Chr1	1813464	1814015	+	Y/N
OSA-LNC9270186	LOC9270186	Intergenic	Chr1	1928584	1930385	+	Y/N
OSA-LNC112937813	LOC112937813	Antisense	Chr1	1957384	1961546	+	Y/N
OSA-LNC107281247	LOC107281247	Antisense	Chr1	2000404	2003964	-	Y/N
OSA-LNC9269282	LOC9269282	Intergenic	Chr1	2015872	2018915	-	Y/N
OSA-LNC112937819	LOC112937819	Antisense	Chr1	2050644	2053348	-	Y/N
OSA-LNC107279875	LOC107279875	Intergenic	Chr1	2175036	2177680	+	N/N
OSA-LNC112937828	LOC112937828	Intergenic	Chr1	2306689	2309619	-	N/N
OSA-LNC107280502	LOC107280502	Intergenic	Chr1	2459434	2462326	+	Y/N
OSA-LNC9270286	LOC9270286	Intergenic	Chr1	2481149	2483247	+	Y/N
OSA-LNC9272216	LOC9272216	Intergenic	Chr1	2488350	2491415	+	Y/N
OSA-LNC4324509	LOC4324509	Intergenic	Chr1	2903064	2906103	-	Y/N
OSA-LNC112937863	LOC112937863	Antisense	Chr1	3243138	3244484	-	N/N
OSA-LNC112937870	LOC112937870	Antisense	Chr1	3360497	3361212	+	Y/N
OSA-LNC107279810	LOC107279810	Intergenic	Chr1	3431587	3432472	+	Y/N
OSA-LNC112939558	LOC112939558	Intergenic	Chr1	3535991	3536715	+	N/N
OSA-LNC112937906	LOC112937906	Intergenic	Chr1	3642070	3645058	-	Y/N
OSA-LNC9266294	LOC9266294	Antisense	Chr1	3825601	3827612	+	N/N
OSA-LNC112937940	LOC112937940	Intronic (AS)	Chr1	3861938	3863641	+	Y/N
OSA-LNC107279010	LOC107279010	Antisense	Chr1	3918548	3921258	-	Y/N
OSA-LNC112937943	LOC112937943	Intergenic	Chr1	3998449	4002787	+	Y/N
OSA-LNC9271473	LOC9271473	Intergenic	Chr1	4297755	4302902	-	Y/N
OSA-LNC107280580	LOC107280580	Intergenic	Chr1	4641888	4643286	-	N/N
OSA-LNC4325665	LOC4325665	Intergenic	Chr1	4665711	4669960	+	N/N
OSA-LNC107279861	LOC107279861	Intergenic	Chr1	4737866	4739011	+	Y/N
OSA-LNC9270260	LOC9270260	Intergenic	Chr1	4789629	4795347	+	Y/N
OSA-LNC4326781	LOC4326781	Intergenic	Chr1	4848454	4852261	-	Y/N
OSA-LNC112938004	LOC112938004	Antisense	Chr1	4872501	4873108	+	Y/N
OSA-LNC107279634	LOC107279634	Antisense	Chr1	5038676	5041878	+	N/N
OSA-LNC107281763	LOC107281763	Intergenic	Chr1	5074351	5075371	-	Y/N
OSA-LNC4327320	LOC4327320	Intergenic	Chr1	5103247	5108984	-	Y/N
OSA-LNC107279882	LOC107279882	Antisense	Chr1	5109086	5114851	+	Y/N
OSA-LNC112939592	LOC112939592	Intergenic	Chr1	5336917	5338069	+	N/N
OSA-LNC107281454	LOC107281454	Intergenic	Chr1	5397398	5399281	+	Y/N
OSA-LNC112937661	LOC112937661	Intergenic	Chr1	5757445	5758353	-	N/N
OSA-LNC112938205	LOC112938205	Antisense	Chr1	5855179	5857260	-	N/N
OSA-LNC107279203	LOC107279203	Antisense	Chr1	6017045	6023648	+	Y/N
OSA-LNC107277386	LOC107277386	Intergenic	Chr1	6327501	6330823	-	Y/N
OSA-LNC112937656	LOC112937656	Intergenic	Chr1	6609740	6610752	+	N/N
OSA-LNC107279549	LOC107279549	Overlapping (AS)	Chr1	6655883	6663338	-	Y/N
OSA-LNC112938268	LOC112938268	Intergenic	Chr1	6656764	6657263	+	Y/N
OSA-LNC9272073	LOC9272073	Intergenic	Chr1	7414712	7415381	-	N/N
OSA-LNC107280227	LOC107280227	Intergenic	Chr1	7485846	7492309	-	Y/N
OSA-LNC112938773	LOC112938773	Intergenic	Chr1	7528485	7529214	+	N/N
OSA-LNC107280519	LOC107280519	Intergenic	Chr1	7626117	7633946	-	Y/N
OSA-LNC107281439	LOC107281439	Intergenic	Chr1	7706154	7707652	-	Y/N
OSA-LNC4327712	LOC4327712	Intergenic	Chr1	8465568	8469431	-	Y/N
OSA-LNC107279884	LOC107279884	Intergenic	Chr1	8629349	8629908	+	Y/N
OSA-LNC9266121	LOC9266121	Intergenic	Chr1	8630343	8633652	-	Y/N
OSA-LNC9269653	LOC9269653	Intergenic	Chr1	8689073	8689827	-	Y/N
OSA-LNC112938363	LOC112938363	Intergenic	Chr1	8779448	8779762	+	N/N
OSA-LNC112939620	LOC112939620	Intergenic	Chr1	8831901	8832744	+	N/N
OSA-LNC4326210	LOC4326210	Intergenic	Chr1	9042204	9054052	-	Y/N
OSA-LNC9267774	LOC9267774	Antisense	Chr1	9651104	9653152	+	Y/N
OSA-LNC4327910	LOC4327910	Intergenic	Chr1	10159759	10163114	+	Y/N
OSA-LNC9268070	LOC9268070	Intergenic	Chr1	10214075	10217437	+	Y/N
OSA-LNC107281754	LOC107281754	Intergenic	Chr1	10220729	10222048	+	Y/N
OSA-LNC4327917	LOC4327917	Antisense	Chr1	10272713	10276158	+	Y/N
OSA-LNC107280332	LOC107280332	Antisense	Chr1	10313724	10316449	-	Y/N
OSA-LNC112938688	LOC112938688	Intergenic	Chr1	10319464	10320575	+	Y/N
OSA-LNC9269543	LOC9269543	Intergenic	Chr1	10346243	10350000	-	Y/N
OSA-LNC9271424	LOC9271424	Intergenic	Chr1	10932443	10933680	-	Y/N
OSA-LNC112938710	LOC112938710	Intergenic	Chr1	10940633	10943978	-	Y/N
OSA-LNC112938726	LOC112938726	Intergenic	Chr1	11012203	11013811	+	Y/N
OSA-LNC112938729	LOC112938729	Intergenic	Chr1	11070816	11071962	+	Y/N
OSA-LNC4325783	LOC4325783	Intergenic	Chr1	11075066	11077908	+	Y/N
OSA-LNC107278119	LOC107278119	Intergenic	Chr1	11118683	11119334	+	Y/N
OSA-LNC4325787	LOC4325787	Intergenic	Chr1	11129396	11131870	+	Y/N
OSA-LNC107280369	LOC107280369	Antisense	Chr1	11528700	11531988	-	N/N
OSA-LNC112938747	LOC112938747	Antisense	Chr1	11609876	11611632	-	Y/N
OSA-LNC107281705	LOC107281705	Intergenic	Chr1	11875774	11877191	+	Y/N
OSA-LNC107281404	LOC107281404	Intergenic	Chr1	12150319	12151423	+	Y/N
OSA-LNC107281332	LOC107281332	Intergenic	Chr1	12301243	12302570	+	N/N
OSA-LNC107280183	LOC107280183	Antisense	Chr1	12500233	12503105	-	Y/N
OSA-LNC4326975	LOC4326975	Intergenic	Chr1	12627777	12630263	+	Y/N
OSA-LNC107281750	LOC107281750	Intergenic	Chr1	12661413	12666459	-	Y/N