Chr:
Chr1
Start:
2000404
End:
2003964
Strand:
-
Ref_name:
LOC107281247
Sequence
(XR_003240397.1):
AUGCGUAGCGUCCCCCACAACCAAACAGCACCACCACCCGGAAGCCGUGUAGAUGCCGAAGCGCCCGGCGAGCGGCCGCCAUGGCCGUGACCGGCCACAGUUCAGUCGCAGGUGUAAACGCCGAUUUCGCGGCCUUAGCCACGAAGGGAGUCGCCGAACAAAGGAUAGUCCCCACCCUGUCCGGCUCGGUGAUGACGGCAGUUAGAUCGGCGGAUGGGGAAUUGCGGCAGCGGUGAGCCGGUGACUGUGGGGAAUUACGGCAGCGGCAGCAGCGCCGGCAGGGGAGGCUGCUACUGUUGUUCAUACACGAGUAGCCCCGGCACGUUGGGCAGAAGCUUAUCGAGGUCGGAGAGAGGUGCCCGCUUCAUCUCCAGAGGAGACAAGUUCACUUCUUUACAGCUAACUGAUUGUCUAGAACAGUCCAACACUUGACUGAACUGUUCAACAAAAGGAUUGACCGUAGCUAAUGUAAUAAUAGUGCACUGAAAGUAUUGAAUAUUGUCCUGUCAUGUUACCAAGUAAUCAAUAUCAUUAAAGAUUUGCAUAGAGUAGUGUUGAAUGUUGAUGGUGCCAGUUGUGGGGUUUAUCAGCACGGUGAAUACUACGAGCAUGGACACACACGUACCAGGAAUGGGCGAUAUGCAUCCUGCAGCGCAACAAUGGGGUGUAUGAGUGUAUCGAUGGUGUGCAGCUGGAGCGUGGCCAAUGCUACUACUACAUCCGCAUUUUAAUAGACGACGCUGACGAUUUUUGAAAUAAUGUUUGAUCGUUUUGUUCGUCUUAUUUCUUUAAAAAAUUAUCAACACGUUAUUUAUUAAAAAACGAUCAUUGUUCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
12.8%
ME_num:
MEP:
64.23%
HE_num:
HEP:
22.76%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.65
Avg Expression:
9.22
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hN | 1.05088151233854 | 0.00176213715484801 |