Chr:
Chr1
Start:
2459434
End:
2462326
Strand:
+
Ref_name:
LOC107280502
Sequence
(XR_001544918.2):
GGCCCAAAUGCCGCAUGAUAUCCUUUGACCUUGCGUUGCCGGCGGCGGUUAUUACGGCCAUGGAGAUCUCGCGCGGCCAUUUGCCGGUGAGGUCGGCUGCUUCGCCGGCGCCUCCGCCUCCGCAUCUACGCCUGGUUGAUCCCCCAACGCUAUCUCCACUGUGCUAUCGCGUUUCCGGCGGUGGUUGAUCGAGGCGGUAGCCCGUGCGGCGCGCGAGAUUCCGCUCGUCCAUGGAUUUCCGGUCGCCGUCGCCGGGAUUCGUCUUCUCCGGCCAGCCCCUCGCCGCGCGAACCUGCGCCGCCCGUCCUCGGCAAGGAUCUGAUCGGGAUCGCUUGUGGGGGAACGUUGACUUGUAAGAAGACCAGAGCCAUCUGUUCUGAUUUGAGAGGCCUGUAUAUUAACCUGUCAAAGACUCAAAGAGCAGCGAAGGAAAUGUUUCAUAGCCUUGUUAGACAUAACUUUGCCAGGAGAUCUGUCUGUUUUGAUGCCCACAGGCUGUUAUGGGGGUUGCUAGUCACUUGCUCUUACAUGCCCUUCUGCUGGCAUAAGAUGAUAGUCUGGUGUAGGUUCUGUUGUUGAACCCUGGAAGUCUGGAACACAACCGGUGCUCAGAAGACUUUCAUAUCACUGCAGCCUACCAGGAUUUGAUAGAGCAAUUUGAUAUGUUUGGUGAAAAUUCAUACACAUUUGAGUUAUUGUACAAUACUCAGAAAUUGGUGUUUUCUAUCCUCUGGUAAUUGUGGAUCACUGGCAUAUUGAAGAAUCAAACCUGACAUAUAAUUGCCAGGGUCUGUAAUUUUUAUACAUGUGGAGAUUGGUGUGCAUACCAAAUGUUCUGCAUCAUGUAAUCAGAAGAGUUGUUUAGGAGAGGCAUAGGCAAAUUCCCUUGUAAGGCUUUUGUAGUUCCUUGAGUGAACGUAGUUAUAACAGUUCUGUUUUCUACGACAAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
36.99%
ME_num:
MEP:
43.29%
HE_num:
HEP:
19.51%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root_elongation_zone
Tau :
0.70
Avg Expression:
10.79
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | 8.75461943142269 | 7.19302334109115e-10 |
| 2 | WD20342 // leaf // none (control)--/--WD20342 // leaf // 0.5% Na2CO3 solution for 36h | 6.52822341954755 | 0.000241002335433698 |