RiceNCexp:Browse

LncRNA Genes Basic Information

We obtained 7898 novel rice lncRNAs based on transcript assembly. The names of these novel lncRNAs are prefixed with "OSA-LNCN".

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

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Fliter by DE/TSE:

total numbers: 11014

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Name	Ref_name	Classification	Chromosome	Start	End	Strand	DE/TSE
OSA-LNC112938802	LOC112938802	Intronic (AS)	Chr1	12907139	12909375	-	Y/N
OSA-LNC112937699	LOC112937699	Intergenic	Chr1	13149270	13149967	-	N/N
OSA-LNC9270788	LOC9270788	Intergenic	Chr1	13198365	13199668	-	Y/N
OSA-LNC4326848	LOC4326848	Intergenic	Chr1	13265550	13268356	+	Y/N
OSA-LNC112939074	LOC112939074	Intergenic	Chr1	13270375	13272012	+	Y/N
OSA-LNC112938847	LOC112938847	Intergenic	Chr1	13461267	13461883	-	N/N
OSA-LNC9266164	LOC9266164	Antisense	Chr1	13508322	13508959	-	Y/N
OSA-LNC107280464	LOC107280464	Intergenic	Chr1	13593861	13598054	+	Y/N
OSA-LNC4326470	LOC4326470	Intergenic	Chr1	13899521	13900724	-	Y/N
OSA-LNC4326474	LOC4326474	Intergenic	Chr1	13934394	13936611	+	Y/N
OSA-LNC112938966	LOC112938966	Intergenic	Chr1	14085207	14086549	-	N/N
OSA-LNC112938967	LOC112938967	Intergenic	Chr1	14147567	14150713	-	Y/N
OSA-LNC4326275	LOC4326275	Intergenic	Chr1	14197285	14199514	+	Y/N
OSA-LNC107281736	LOC107281736	Intergenic	Chr1	14240406	14241517	+	N/N
OSA-LNC107279846	LOC107279846	Antisense	Chr1	14295541	14297886	+	Y/N
OSA-LNC107281710	LOC107281710	Intergenic	Chr1	14321062	14323329	-	Y/N
OSA-LNC107275343	LOC107275343	Intergenic	Chr1	14377090	14377957	-	N/N
OSA-LNC4326029	LOC4326029	Intergenic	Chr1	14702420	14703807	-	Y/N
OSA-LNC107281786	LOC107281786	Antisense	Chr1	14745972	14748507	+	Y/N
OSA-LNC107280213	LOC107280213	Intergenic	Chr1	14775714	14777987	-	Y/N
OSA-LNC9266820	LOC9266820	Intergenic	Chr1	14780948	14786489	-	Y/N
OSA-LNC9269059	LOC9269059	Intergenic	Chr1	14828465	14829247	-	Y/N
OSA-LNC9269648	LOC9269648	Intergenic	Chr1	14900622	14903064	+	Y/N
OSA-LNC112937651	LOC112937651	Intergenic	Chr1	14952050	14953229	+	Y/N
OSA-LNC4325725	LOC4325725	Intergenic	Chr1	14955698	14959974	+	Y/N
OSA-LNC4325703	LOC4325703	Intergenic	Chr1	15162375	15169311	+	Y/N
OSA-LNC107281098	LOC107281098	Intergenic	Chr1	15338074	15342641	+	Y/N
OSA-LNC107280746	LOC107280746	Intergenic	Chr1	15380236	15382747	+	Y/N
OSA-LNC107276984	LOC107276984	Intergenic	Chr1	15383013	15385741	-	N/N
OSA-LNC9269634	LOC9269634	Intergenic	Chr1	15541986	15543819	+	Y/N
OSA-LNC9270975	LOC9270975	Intergenic	Chr1	15759547	15763124	+	Y/N
OSA-LNC4325419	LOC4325419	Intergenic	Chr1	15845607	15847984	-	N/N
OSA-LNC112939039	LOC112939039	Intergenic	Chr1	15879379	15881058	-	Y/N
OSA-LNC112939042	LOC112939042	Intergenic	Chr1	15960359	15962263	-	Y/N
OSA-LNC112939047	LOC112939047	Intergenic	Chr1	16027301	16028024	-	N/N
OSA-LNC107280736	LOC107280736	Intergenic	Chr1	16028692	16030965	-	Y/N
OSA-LNC112939050	LOC112939050	Intergenic	Chr1	16103425	16104774	-	Y/N
OSA-LNC107279876	LOC107279876	Intergenic	Chr1	16201970	16205191	+	Y/N
OSA-LNC9270533	LOC9270533	Intergenic	Chr1	16232115	16234513	+	Y/N
OSA-LNC112939051	LOC112939051	Intergenic	Chr1	16279087	16280003	+	Y/N
OSA-LNC9266303	LOC9266303	Intergenic	Chr1	16296163	16300262	-	Y/N
OSA-LNC107278133	LOC107278133	Intergenic	Chr1	16315788	16318740	+	N/N
OSA-LNC4325223	LOC4325223	Intergenic	Chr1	16347015	16348893	-	Y/N
OSA-LNC4325233	LOC4325233	Intergenic	Chr1	16533619	16542505	-	Y/N
OSA-LNC9267988	LOC9267988	Intergenic	Chr1	16588803	16597630	+	Y/N
OSA-LNC107280761	LOC107280761	Intergenic	Chr1	16609750	16613727	-	Y/N
OSA-LNC107277807	LOC107277807	Intergenic	Chr1	16631075	16637328	-	Y/N
OSA-LNC112939082	LOC112939082	Antisense	Chr1	16695962	16705337	-	N/N
OSA-LNC9268740	LOC9268740	Intergenic	Chr1	16716638	16719376	+	Y/N
OSA-LNC9267435	LOC9267435	Intergenic	Chr1	17076620	17077574	-	Y/N
OSA-LNC4324545	LOC4324545	Intergenic	Chr1	17275532	17278335	-	Y/N
OSA-LNC107275663	LOC107275663	Intergenic	Chr1	17294007	17299766	-	Y/N
OSA-LNC107281700	LOC107281700	Intergenic	Chr1	17600255	17602247	+	Y/N
OSA-LNC112939232	LOC112939232	Intergenic	Chr1	17681377	17682888	+	Y/N
OSA-LNC4324052	LOC4324052	Intergenic	Chr1	17792155	17794513	+	Y/N
OSA-LNC4324020	LOC4324020	Intergenic	Chr1	17881774	17885735	-	Y/N
OSA-LNC107281351	LOC107281351	Intergenic	Chr1	17921777	17922899	-	Y/N
OSA-LNC107279855	LOC107279855	Intergenic	Chr1	17959120	17960672	+	Y/N
OSA-LNC107281399	LOC107281399	Intergenic	Chr1	18011860	18012693	+	N/N
OSA-LNC107279866	LOC107279866	Intergenic	Chr1	18021925	18026334	+	Y/N
OSA-LNC4324034	LOC4324034	Intergenic	Chr1	18026554	18029636	-	Y/N
OSA-LNC9270562	LOC9270562	Intergenic	Chr1	18035208	18036667	-	Y/N
OSA-LNC9271846	LOC9271846	Intergenic	Chr1	18130227	18132854	-	Y/N
OSA-LNC4323977	LOC4323977	Intergenic	Chr1	18446941	18448948	+	N/N
OSA-LNC4323980	LOC4323980	Intergenic	Chr1	18555670	18560266	+	Y/N
OSA-LNC9271859	LOC9271859	Intergenic	Chr1	18582297	18587847	+	Y/N
OSA-LNC112939270	LOC112939270	Intergenic	Chr1	18587542	18589778	-	Y/N
OSA-LNC9267014	LOC9267014	Intergenic	Chr1	18728198	18731113	-	Y/N
OSA-LNC112939281	LOC112939281	Overlapping (S)	Chr1	18822852	18828644	+	Y/N
OSA-LNC112939306	LOC112939306	Intergenic	Chr1	19097949	19104989	+	Y/N
OSA-LNC9269968	LOC9269968	Intergenic	Chr1	19106724	19107564	-	Y/N
OSA-LNC107278534	LOC107278534	Intergenic	Chr1	19229284	19231913	-	N/N
OSA-LNC112939323	LOC112939323	Intergenic	Chr1	19375559	19378722	+	Y/N
OSA-LNC112939652	LOC112939652	Intergenic	Chr1	19605004	19605970	+	N/N
OSA-LNC107281801	LOC107281801	Intergenic	Chr1	19627353	19627835	+	N/N
OSA-LNC4326424	LOC4326424	Intergenic	Chr1	19690210	19693504	+	Y/N
OSA-LNC107281791	LOC107281791	Intergenic	Chr1	19707934	19710529	-	Y/N
OSA-LNC112939331	LOC112939331	Intergenic	Chr1	19919083	19920108	-	Y/N
OSA-LNC112939333	LOC112939333	Intergenic	Chr1	19954647	19954973	+	Y/N
OSA-LNC4326873	LOC4326873	Intergenic	Chr1	20041600	20044750	+	Y/N
OSA-LNC112939573	LOC112939573	Intergenic	Chr1	20205123	20205969	-	Y/N
OSA-LNC107281467	LOC107281467	Intergenic	Chr1	20212002	20213558	-	Y/N
OSA-LNC9269411	LOC9269411	Intergenic	Chr1	20407293	20415063	-	Y/N
OSA-LNC112937658	LOC112937658	Intergenic	Chr1	20416271	20417375	+	Y/N
OSA-LNC4325852	LOC4325852	Intergenic	Chr1	20746726	20750490	-	Y/N
OSA-LNC112939589	LOC112939589	Intergenic	Chr1	20829712	20831699	-	N/N
OSA-LNC107278527	LOC107278527	Intergenic	Chr1	20868852	20873062	+	Y/N
OSA-LNC107279849	LOC107279849	Intergenic	Chr1	20952097	20953115	+	N/N
OSA-LNC9269541	LOC9269541	Intergenic	Chr1	21338111	21340948	-	Y/N
OSA-LNC9267960	LOC9267960	Intergenic	Chr1	21447484	21450116	-	Y/N
OSA-LNC9270518	LOC9270518	Intronic (AS)	Chr1	21534057	21537977	-	Y/N
OSA-LNC107281430	LOC107281430	Intergenic	Chr1	21888661	21889886	+	Y/N
OSA-LNC112939437	LOC112939437	Intergenic	Chr1	21945924	21947523	+	Y/N
OSA-LNC9270426	LOC9270426	Intergenic	Chr1	21956758	21963354	+	Y/N
OSA-LNC107281760	LOC107281760	Intergenic	Chr1	22010758	22012480	-	Y/N
OSA-LNC112939441	LOC112939441	Intergenic	Chr1	22032368	22034029	-	Y/N
OSA-LNC107277654	LOC107277654	Intergenic	Chr1	22185284	22186073	-	Y/N
OSA-LNC107281673	LOC107281673	Intergenic	Chr1	22198944	22199938	+	Y/N
OSA-LNC9272081	LOC9272081	Intronic (S)	Chr1	22221781	22222615	+	Y/N
OSA-LNC112939649	LOC112939649	Intergenic	Chr1	22388335	22389348	-	N/N