RiceNCexp:Browse

miRNAs Basic Information

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

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total numbers: 1299

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Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN2369	PmiREN	Chr12	14944232	14944252	+	N/Y
Osa-miRN2368	PmiREN	Chr11	23042124	23042144	-	N/N
Osa-miRN2365	PmiREN	Chr7	6687478	6687498	+	N/N
Osa-miRN2367	PmiREN	Chr7	5730366	5730386	+	N/N
Osa-miRN2366	PmiREN	Chr7	15967943	15967963	-	N/Y
Osa-miRN2361	PmiREN	Chr4	12965130	12965150	+	N/N
Osa-miRN2360	PmiREN	Chr4	17717355	17717375	+	N/N
Osa-miRN2363	PmiREN	Chr6	24709936	24709956	+	N/Y
Osa-miRN2362	PmiREN	Chr5	24797708	24797728	+	Y/N
Osa-miRN2285d	PmiREN	Chr11	6974869	6974888	-	Y/Y
Osa-miRN2285e	PmiREN	Chr4	598059	598078	+	Y/Y
Osa-miRN2285f	PmiREN	Chr6	23376294	23376313	-	Y/Y
Osa-miRN2285a	PmiREN	Chr10	17481035	17481054	+	Y/Y
Osa-miR5536	PmiREN	Chr2	19457533	19457553	+	N/N
Osa-miRN2228a	PmiREN	Chr4	4926830	4926850	-	N/Y
Osa-miRN2281a	PmiREN	Chr4	16545760	16545780	+	Y/N
Osa-miRN2229b	PmiREN	Chr8	26953695	26953715	-	Y/Y
Osa-miRN2229c	PmiREN	Chr8	705385	705405	+	Y/Y
Osa-miRN2229a	PmiREN	Chr5	7377922	7377942	-	Y/Y
Osa-miRN2281b	PmiREN	Chr8	3513112	3513132	+	Y/N
Osa-miRN2318	PmiREN	Chr12	7555497	7555517	+	N/N
Osa-miRN01	RiceNCexp	Chr1	2068759	2068778	-	N/N
Osa-miRN02	RiceNCexp	Chr1	2309154	2309173	-	Y/N
Osa-miRN03	RiceNCexp	Chr1	2309230	2309250	-	Y/Y
Osa-miRN04	RiceNCexp	Chr1	4766346	4766366	-	Y/N
Osa-miRN05	RiceNCexp	Chr1	4766347	4766367	-	Y/N
Osa-miRN06	RiceNCexp	Chr1	4766354	4766373	-	N/N
Osa-miRN07	RiceNCexp	Chr1	4766362	4766382	-	N/N
Osa-miRN08	RiceNCexp	Chr1	4766513	4766533	-	N/N
Osa-miRN09	RiceNCexp	Chr1	11666844	11666864	-	Y/Y
Osa-miRN10	RiceNCexp	Chr1	11667021	11667041	-	N/N
Osa-miRN11	RiceNCexp	Chr1	11667043	11667064	-	N/N
Osa-miRN12	RiceNCexp	Chr1	11667044	11667064	-	N/N
Osa-miRN13	RiceNCexp	Chr1	12301814	12301833	+	Y/N
Osa-miRN14	RiceNCexp	Chr1	14130486	14130507	+	N/N
Osa-miRN15	RiceNCexp	Chr1	18049428	18049448	+	N/N
Osa-miRN16	RiceNCexp	Chr1	22524220	22524239	-	Y/N
Osa-miRN17	RiceNCexp	Chr1	39048236	39048255	+	N/N
Osa-miRN18	RiceNCexp	Chr1	41260752	41260771	-	Y/N
Osa-miRN19	RiceNCexp	Chr2	4345573	4345594	+	N/N
Osa-miRN20	RiceNCexp	Chr2	18307627	18307646	-	N/N
Osa-miRN21	RiceNCexp	Chr2	18942099	18942118	-	N/N
Osa-miRN22	RiceNCexp	Chr2	24120061	24120081	-	Y/Y
Osa-miRN23	RiceNCexp	Chr2	25135004	25135024	-	Y/N
Osa-miRN24	RiceNCexp	Chr2	27148168	27148188	+	Y/N
Osa-miRN25	RiceNCexp	Chr2	31205965	31205984	-	Y/Y
Osa-miRN26	RiceNCexp	Chr2	34280395	34280414	+	Y/Y
Osa-miRN27	RiceNCexp	Chr3	22088085	22088104	-	N/N
Osa-miRN28	RiceNCexp	Chr3	25574715	25574736	+	N/N
Osa-miRN29	RiceNCexp	Chr3	31059086	31059106	-	N/Y
Osa-miRN30	RiceNCexp	Chr3	32454996	32455015	+	Y/N
Osa-miRN31	RiceNCexp	Chr3	33130637	33130656	+	N/Y
Osa-miRN32	RiceNCexp	Chr4	19420175	19420194	+	Y/N
Osa-miRN33	RiceNCexp	Chr4	25026401	25026420	-	Y/Y
Osa-miRN34	RiceNCexp	Chr4	26976691	26976711	-	N/N
Osa-miRN35	RiceNCexp	Chr4	27823597	27823617	-	N/N
Osa-miRN36	RiceNCexp	Chr4	29042291	29042310	+	Y/N
Osa-miRN37	RiceNCexp	Chr4	33303616	33303635	+	Y/N
Osa-miRN38	RiceNCexp	Chr4	34236111	34236130	-	Y/N
Osa-miRN39	RiceNCexp	Chr5	5230736	5230756	+	Y/Y
Osa-miRN40	RiceNCexp	Chr5	26311266	26311287	+	N/N
Osa-miRN41	RiceNCexp	Chr6	673536	673555	-	N/N
Osa-miRN42	RiceNCexp	Chr6	17877817	17877837	-	N/N
Osa-miRN43	RiceNCexp	Chr6	26554835	26554856	+	Y/Y
Osa-miRN44	RiceNCexp	Chr7	2216843	2216862	-	Y/N
Osa-miRN45	RiceNCexp	Chr8	1707574	1707594	+	Y/N
Osa-miRN46	RiceNCexp	Chr8	23072750	23072771	+	N/N
Osa-miRN47	RiceNCexp	Chr8	23072797	23072818	-	N/N
Osa-miRN48	RiceNCexp	Chr8	26807360	26807381	+	Y/Y
Osa-miRN49	RiceNCexp	Chr8	26814007	26814027	+	Y/N
Osa-miRN50	RiceNCexp	Chr8	26817569	26817589	+	Y/N