Chr:
Chr2
Start:
25135004
End:
25135024
Strand:
-
Sequence:
AUGCCUGGCUCCCUGUAUGCC
Length:
21
precursor sequence:
AUGCCUGGCUCCCUGUAUGCCUGCAGGAGCACUAACGUCGGGGAACGGGAAGAAGGACGGGUGGUUGUGAUGGUAAUGGUGGUGGCCGUGUGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
11
NEP:
4.01%
LE_num:
LEP:
4.01%
ME_num:
MEP:
79.2%
HE_num:
HEP:
12.77%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
ovary
Tau :
0.82
Avg Expression:
34.30
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -2.29846909730878 | 0.0276398585126553 |
2 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.43978907262794 | 0.000118051863302922 |
3 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_eaR_bphly | 1.10618679297378 | 0.022579668027152 |