Osa-miRN2367_PmiREN


Function Link


Basic Info

Chr:

Chr7

Start:

5730366

End:

5730386

Strand:

+

Sequence:

AGUAGAACAAGAGCAUAGCAG

Length:

21

precursor sequence:

UACCCAUAAAAACUCCCGCUGCAUCUCAUGUUCUAUCCUGAUCCUCAAUCCAACACCACUUUACUAAGCAAAAGUUAUAUGCGCGAAAAUUGUUGUGUUUACGAUACACAAAAUUGCAAAACAAAGUGCUGCUGAAUUCUAUAAGAAUGGGAAGCAUUCAGAAAGCAAGAGUUUUUCCAAGAGAGGCAGUACUGCAGUAGAACAAGAGCAUAGCAGCUUGGCUCCAAGGGUAGACC


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

215

NEP:

78.47%

LE_num:

6

LEP:

2.19%

ME_num:

52

MEP:

18.98%

HE_num:

1

HEP:

0.36%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

pollen

Tau :

0.90

Avg Expression:

2.91

Tip: Osa-miRN2367_PmiREN is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
Tip: Osa-miRN2367_PmiREN is not a differential expression ncRNA.