Chr:
Chr4
Start:
16545760
End:
16545780
Strand:
+
Sequence:
UGUAUGUGGUCAAUGCUAGAA
Length:
21
precursor sequence:
GUUUCACAAUGUAAGACUUUCUAGCAUUGCCCACAUUCAUUUAGAUGUUAAUGAAUCUAGACAUAUAUUAACAUCUAUAUGUAUGUGGUCAAUGCUAGAAAGAUUUACAUUGUGAAACGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
130
NEP:
47.45%
LE_num:
LEP:
18.98%
ME_num:
MEP:
33.58%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.95
Avg Expression:
6.82
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | 1.4721571553698 | 0.00607996923179682 |
| 2 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_8h | 1.24416311790845 | 0.0341636936237383 |
| 3 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.29867396501133 | 0.0236278297516382 |