Chr:
Chr8
Start:
1707574
End:
1707594
Strand:
+
Sequence:
GUGCCUGGCUCCCUGUAUGCC
Length:
21
precursor sequence:
GUGCCUGGCUCCCUGUAUGCCACUCAUCUAGAGCAACAAACUUCUGCGAGAGGUUGCCUAUGAUGGAUGGCGUGCACGGAGCCAAGCAUAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.36%
LE_num:
LEP:
0.36%
ME_num:
MEP:
36.13%
HE_num:
HEP:
63.14%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
lamina_joint
Tau :
0.87
Avg Expression:
438.76
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 24h | 2.81880868007472 | 0.000476343594513471 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -1.29159366001136 | 0.000276121711816319 |
| 3 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | -1.22947852833391 | 0.000369485179443946 |
| 4 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -2.21919183544017 | 0.0430043001049405 |
| 5 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_eaR_bphly | 1.35402459618016 | 4.92922954792202e-10 |