Chr:
Chr2
Start:
27148168
End:
27148188
Strand:
+
Sequence:
UUGGCAUUCUGUCCACCUCCU
Length:
21
precursor sequence:
UUGGCAUUCUGUCCACCUCCUUGUCGAAUCCUCAGAGACAGAAAUCUCAUAUCUGUUGAUCUUGGAGGUGGGCAUACUGCCAAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
5
NEP:
1.82%
LE_num:
LEP:
1.46%
ME_num:
MEP:
27.37%
HE_num:
HEP:
69.34%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
blade
Tau :
0.71
Avg Expression:
148.75
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | 1.34381240010021 | 0.00846657256815447 |
| 2 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | 2.07651415464864 | 1.99229483057016e-05 |