RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Confidence	Chromosome	Start	End	Strand	DE/TSE
osa-miR171h	miRbase		Chr4	28482509	28482529	+	Y/Y
osa-miR393b-5p	miRbase		Chr4	34931960	34931981	-	Y/Y
osa-miR393b-3p	miRbase		Chr4	34931885	34931905	-	Y/Y
osa-miR408-5p	miRbase		Chr1	12301691	12301711	+	Y/Y
Osa-miR408	miRbase/PmiREN	/	Chr1	12301813	12301833	+	Y/N
osa-miR172d-5p	miRbase		Chr2	35143626	35143645	-	Y/Y
Osa-miR172d	miRbase/PmiREN	/	Chr2	35143556	35143576	-	Y/N
osa-miR171i-5p	miRbase		Chr3	21191610	21191630	+	Y/N
osa-miR171i-3p	miRbase		Chr3	21191690	21191710	+	Y/N
osa-miR167j	miRbase		Chr1	32686182	32686202	-	Y/N
osa-miR166m	miRbase		Chr8	23045502	23045522	+	Y/Y
osa-miR166j-5p	miRbase		none	none	none	none	Y/N
osa-miR166j-3p	miRbase		none	none	none	none	Y/N
Osa-miR164f	miRbase/PmiREN	/	Chr5	23343931	23343951	+	Y/N
osa-miR413	miRbase		Chr12	10136385	10136405	+	N/N
osa-miR414	miRbase		Chr11	15504904	15504924	+	N/N
osa-miR415	miRbase		Chr12	26270580	26270600	-	N/N
osa-miR416	miRbase		Chr4	17456252	17456272	+	N/N
osa-miR417	miRbase		Chr8	14939896	14939916	+	N/N
osa-miR418	miRbase		Chr2	35182642	35182662	-	N/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

osa-miR171h

miRbase

Chr4