Chr:
Chr2
Start:
35143556
End:
35143576
Strand:
-
Sequence:
AGAAUCUUGAUGAUGCUGCAU
Length:
21
precursor sequence:
AACAGUCGGUGCUUGCAGGUGCAGCACCAUCAAGAUUCACAUCGAGUUCAUCCCUAAACGAGAUCGAGGUUGGCUGACUAUAUGUGAUGAGAAUCUUGAUGAUGCUGCAUCAGCAAACGCUCGACUACUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
19
NEP:
6.93%
LE_num:
LEP:
9.49%
ME_num:
MEP:
54.38%
HE_num:
HEP:
29.2%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.89
Avg Expression:
2285.60
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 12h | 2.0046679044221 | 0.0290653840285839 |
| 2 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 24h | 2.42592612392775 | 0.000446671394342437 |
| 3 | zhonghua11 // panicle // wild-type--/--zhonghua11 // panicle // rdr701-1 mutant | 2.51716941211766 | 0.00526836176043768 |