| SRR3140955 | leaf | "45C, 12h" | 6.65 | MC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 1.04 | MC |
| SRR5120079 | leaf_sheath | PC_0 | 8.49 | MC |
| SRR10690152 | leaf | IRBB5_0h | 2.03 | MC |
| SRR7058097 | leaf | rice_mock | 4.33 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 0.31 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 0.28 | MC |
| SRR7058098 | leaf | rice_RSV | 10.96 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3.72 | MC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 2.45 | MC |
| SRR2154074 | seed | Nipponbare_seed | 0.26 | MC |
| SRR10690151 | leaf | IRBB5_0h | 1.52 | MC |
| SRR2154072 | seed | Rathuwee_seed | 0.36 | MC |
| SRR2154070 | seed | Guangluai4_seed | 0.50 | MC |
| SRR2154071 | seed | KDM105_seed | 0.45 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 3.92 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 10.80 | MC |
| SRR1061625 | panicle | Heat Stress | 0.89 | MC |
| SRR1061624 | panicle | Normal | 0.32 | MC |
| SRR1061622 | flag_leaf | Normal | 4.66 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 6.12 | MC |
| SRR1061620 | flag_leaf | Normal | 6.07 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 5.24 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.91 | MC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 0.42 | MC |
| SRR9070101 | shoot_base | WT_base | 2.78 | MC |
| SRR089619 | panicle | control | 1.01 | MC |
| SRR447135 | shoot | As(III) 20 uM | 25.39 | MC |
| SRR447134 | shoot | As(III) 80 uM | 11.37 | MC |
| SRR447133 | shoot | As(III) 20 uM | 11.86 | MC |
| SRR447132 | shoot | control for As(III) 20/80 uM | 5.99 | MC |
| SRR447130 | root | As(III) 20 uM | 0.52 | MC |
| SRR1849765 | leaf | Control 30min | 8.11 | MC |
| SRR1849767 | leaf | Control 30min | 7.70 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 1.28 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 12.07 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.88 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 13.27 | MC |
| SRR6498701 | leaf | "WT, Control" | 12.01 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 9.87 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 6.19 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 0.55 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 0.28 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 0.38 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.33 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.49 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.74 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 0.99 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.82 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.62 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.60 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 2.29 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 10.69 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 12.78 | MC |
| SRR1849773 | leaf | Control 120min | 17.56 | MC |
| SRR1849772 | leaf | Control 120min | 10.38 | MC |
| SRR1849771 | leaf | Control 120min | 17.78 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 14.24 | MC |
| SRR7058096 | leaf | rice_mock | 2.36 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.19 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 0.89 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 10.55 | MC |
| SRR6365689 | seedling | Wild type | 1.39 | MC |
| SRR447136 | shoot | As(III) 80 uM | 2.38 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.44 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 6.75 | MC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 0.86 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 8.97 | MC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 3.20 | MC |
| SRR2154075 | seed | Taipei309_seed | 2.32 | MC |
| SRR4098208 | root | No treatment | 0.36 | MC |
| SRR089772 | panicle | wild-type | 12.13 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.97 | MC |
| SRR9070100 | shoot_base | WT_base | 1.70 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 9.31 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.81 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 2.35 | MC |
| SRR8649147 | panicle | panicle tissue | 0.95 | MC |
| SRR4098207 | panicle | No treatment | 1.02 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 3.05 | MC |
| SRR9070102 | shoot_base | WT_base | 1.31 | MC |
| SRR6498699 | leaf | "WT, Control" | 11.36 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 3.11 | MC |
| SRR10690144 | leaf | IR24_0h | 5.95 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.94 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1.88 | MC |
| SRR10690143 | leaf | IR24_0h | 3.79 | MC |
| SRR10690142 | leaf | IR24_0h | 3.41 | MC |
| SRR2646852 | panicle | FP | 0.42 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.79 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 3.64 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 2.55 | MC |
| SRR2646855 | panicle | SP | 0.62 | MC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 2.81 | MC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 3.23 | MC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 0.68 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 7.51 | MC |
| SRR6365690 | seedling | Wild type | 2.81 | MC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 0.76 | MC |
| SRR6365693 | panicle | Wild type | 0.66 | MC |
| SRR6365694 | panicle | Wild type | 0.63 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 1.00 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 0.52 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.15 | MC |
| SRR6810101 | seedling | seedling | 6.41 | MC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 10.58 | MC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 3.28 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.32 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 0.54 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 3.09 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 4.46 | MC |
| SRR10690153 | leaf | IRBB5_0h | 4.71 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.32 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 0.54 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 2.46 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1.12 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 0.88 | MC |
| SRR3110556 | shoot | shoot control | 23.39 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 10.04 | MC |
| SRR1061616 | panicle | Normal | 0.40 | MC |
| SRR1061617 | panicle | Heat Stress | 0.75 | MC |
| SRR1061614 | panicle | Normal | 0.32 | MC |
| SRR1061612 | panicle | Normal | 0.93 | MC |
| SRR1061613 | panicle | Heat Stress | 1.65 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.71 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 11.99 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 5.73 | MC |
| SRR1061618 | flag_leaf | Normal | 3.64 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 3.13 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.43 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 1.00 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.84 | MC |
| SRR089621 | panicle | cold | 1.81 | MC |
| SRR089620 | panicle | drought | 2.50 | MC |
| SRR4098172 | seedling | Cold (4C) | 9.79 | MC |
| SRR6810102 | seedling | seedling | 12.59 | MC |
| SRR10956502 | panicle | WT | 3.59 | MC |
| SRR10956501 | panicle | WT | 4.70 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 1.18 | MC |
| SRR1740023 | seedling | IR64-Control | 0.68 | MC |
| SRR1740025 | seedling | PK-Control | 1.63 | MC |
| SRR1740024 | seedling | N22-Control | 0.85 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 7.61 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 9.76 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.62 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.20 | MC |
| SRR3110557 | shoot | shoot treated | 37.19 | MC |
| SRR5940086 | panicle | Wild type | 2.21 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.32 | MC |