Chr:
Chr8
Start:
23045502
End:
23045522
Strand:
+
Sequence:
UCGGACCAGGCUUCAUUCCCU
Length:
21
precursor sequence:
CUCUGCUUUGGUGGUUGGCUGAUGUUCUCGGUUAAGGGGUUUGUUGUCUGGUUCAAGGCCUCCUGCUGUCCUACAUCACAUUUUUUUUUCUUUGUUCUGAAUUUCUGAUGGAUGUGUGUGUGCAUGAUGCAUGGCUGGUGGUGACCUCGGACCAGGCUUCAUUCCCUUUAACCAGCAUUUGCGUUAAUACCAUCAGGCAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
0
NEP:
0.0%
LE_num:
0
LEP:
0.0%
ME_num:
MEP:
4.38%
HE_num:
HEP:
95.62%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.95
Avg Expression:
3383.80
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(1) | 1.32272519623755 | 4.35745288188433e-10 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -1.8266855923558 | 7.8650051796958e-46 |
| 3 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_24h | -1.185225226937 | 0.0462900211099663 |
| 4 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.13805621456537 | 4.40114076537345e-10 |
| 5 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | 1.39555291216164 | 3.16784527651961e-06 |
| 6 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | 2.18753309235211 | 1.17941045597635e-14 |