Chr:
none
Start:
none
End:
none
Strand:
none
Sequence:
UCGGACCAGGCUUCAUUCCCC
Length:
21
precursor sequence:
UGAUCCAUGGCUGUUGAGAGGAAUGACGUCCGGUCUGAAGAUCGCCGUCCCCAGGCGGUGGCUUCGGACCAGGCUUCAUUCCCCAUGACUCAUGGAACCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
0
NEP:
0.0%
LE_num:
0
LEP:
0.0%
ME_num:
0
MEP:
0.0%
HE_num:
274
HEP:
100.0%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.82
Avg Expression:
37804.56
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | 1.35190341062477 | 2.17392742491827e-23 |
2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | 1.43039036240762 | 5.59730147043398e-32 |
3 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(1) | 3.02644540557609 | 0 |
4 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(2) | 2.41878969119742 | 1.51496563202848e-20 |
5 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -2.73972237915287 | 2.89180354959972e-247 |
6 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.13648272941943 | 4.01117655017965e-10 |