RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Confidence	Chromosome	Start	End	Strand	DE/TSE
osa-miR160f-3p	miRbase		Chr8	24396953	24396973	+	Y/N
Osa-miR162b	miRbase/PmiREN	/	Chr4	24406002	24406022	+	Y/N
Osa-miR164c	miRbase/PmiREN	/	Chr5	17327450	17327470	+	Y/N
osa-miR164d	miRbase		Chr2	33143630	33143650	-	Y/N
Osa-miR164e	miRbase/PmiREN	/	Chr3	10542167	10542187	+	Y/Y
osa-miR166k-5p	miRbase		Chr2	32435097	32435117	-	Y/N
Osa-miR166k	miRbase/PmiREN	/	Chr2	32435013	32435033	-	Y/N
osa-miR166l-5p	miRbase		Chr9	16951829	16951849	+	Y/N
Osa-miR166l	miRbase/PmiREN	/	Chr9	16951903	16951923	+	Y/N
osa-miR167d-5p	miRbase		Chr7	4166374	4166394	-	Y/N
osa-miR167d-3p	miRbase		Chr7	4166303	4166324	-	Y/Y
osa-miR167e-5p	miRbase		Chr2	3742483	3742503	-	Y/N
Osa-miR167e	miRbase/PmiREN	/	Chr2	3742249	3742269	-	Y/N
osa-miR167f	miRbase		Chr10	14723126	14723146	-	Y/N
osa-miR167g	miRbase		Chr3	3347692	3347712	+	Y/N
osa-miR167h-5p	miRbase		Chr12	25480628	25480648	+	Y/N
osa-miR167h-3p	miRbase		Chr12	25480709	25480729	+	Y/N
Osa-miR167i	miRbase/PmiREN	/	Chr6	27674759	27674779	+	Y/N
osa-miR167i-3p	miRbase		Chr6	27674921	27674941	+	Y/N
osa-miR168a-5p	miRbase		Chr2	1553210	1553230	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

osa-miR160f-3p

miRbase

Chr8