Chr:
Chr2
Start:
1553210
End:
1553230
Strand:
-
Sequence:
UCGCUUGGUGCAGAUCGGGAC
Length:
21
precursor sequence:
CGCCUCGGGCUCGCUUGGUGCAGAUCGGGACCCGCCGCCGCCGCUGCCGGGGCCGGAUCCCGCCUUGCACCAAGUGAAUCGGAGCCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
0
NEP:
0.0%
LE_num:
0
LEP:
0.0%
ME_num:
0
MEP:
0.0%
HE_num:
274
HEP:
100.0%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.79
Avg Expression:
23338.44
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | -1.77936973684536 | 0.0242413538157904 |
2 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | -1.70616283417372 | 2.81249669722367e-11 |