Chr:
Chr7
Start:
4166303
End:
4166324
Strand:
-
Sequence:
GAUCAUGCUGUGCAGUUUCAUC
Length:
22
precursor sequence:
CAUUAGGAGCUGAAGCUGCCAGCAUGAUCUGAUGAGUGCUUAUUAGGUGAGGGCAGAAUUGACUGCCAAAACAAAGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUUGUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
45
NEP:
16.42%
LE_num:
LEP:
12.41%
ME_num:
MEP:
70.8%
HE_num:
HEP:
0.36%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.91
Avg Expression:
11.95
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | 1.39096870059291 | 6.66579290263696e-06 |
| 2 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_late | -2.46901118350202 | 1.92615336815323e-11 |
| 3 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | -2.35231602352022 | 1.66704562648415e-11 |