RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR159d	PmiREN	Chr1	6563767	6563786	-	Y/Y
Osa-miR159e	PmiREN	Chr1	9760719	9760738	-	Y/Y
Osa-miR159c	PmiREN	Chr1	6556059	6556078	-	Y/Y
Osa-miR159a	PmiREN	Chr1	6693269	6693288	+	Y/N
Osa-miR5821a	PmiREN	Chr12	24605434	24605454	+	N/N
Osa-miR5821b	PmiREN	Chr6	21881275	21881295	+	N/N
Osa-miRN2357	PmiREN	Chr3	32294553	32294573	+	N/N
Osa-miRN2350	PmiREN	Chr11	24771256	24771276	+	N/N
Osa-miRN2353	PmiREN	Chr12	18625651	18625671	+	N/N
Osa-miRN2269	PmiREN	Chr1	4397489	4397508	+	N/N
Osa-miRN2261	PmiREN	Chr5	20173002	20173022	-	Y/N
Osa-miRN2262	PmiREN	Chr2	31449188	31449207	+	Y/N
Osa-miRN2263	PmiREN	Chr12	2361885	2361905	+	Y/N
Osa-miRN2264	PmiREN	Chr9	13604993	13605013	+	N/Y
Osa-miR1846a	PmiREN	Chr10	529306	529329	+	Y/N
Osa-miRN2266	PmiREN	Chr2	720919	720939	+	Y/N
Osa-miR5799	PmiREN	Chr1	3400995	3401018	-	N/N
Osa-miRN2358	PmiREN	Chr3	32278135	32278155	-	N/Y
Osa-miRN2359	PmiREN	Chr4	13137356	13137376	-	N/Y
Osa-miR156m	PmiREN	Chr8	21491234	21491254	+	Y/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR159d

PmiREN

Chr1