Chr:
Chr2
Start:
720919
End:
720939
Strand:
+
Sequence:
ACGGAGAGGGAAAAAGGCGCC
Length:
21
precursor sequence:
GGAGAGGGCCGACCGGCCGGCGCCUCCUUCUCUCUCCCUCCCGGCCAUCCUUCCUCCCCGGCCGGCGAGCGCGCACGGAGAGGGAAAAAGGCGCCGGCCGGGGAGGAAGGAUGGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
43
NEP:
15.69%
LE_num:
LEP:
16.79%
ME_num:
MEP:
62.04%
HE_num:
HEP:
5.47%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.82
Avg Expression:
9.71
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -1.57308202764392 | 0.0181901049634993 |
| 2 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_late | 1.64546313346341 | 0.000155796885646302 |
| 3 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.13927563460945 | 0.0270917342174346 |