| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 5.34 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 4.75 | MC |
| SRR8258050 | leaf_sheath | R_bph | 3.68 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 5.93 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 3.79 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 4.55 | MC |
| SRR10690152 | leaf | IRBB5_0h | 1.90 | MC |
| SRR7058097 | leaf | rice_mock | 16.56 | MC |
| SRR7058098 | leaf | rice_RSV | 11.41 | MC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1.16 | MC |
| SRR2154076 | seedling | Guangluai4_seedling | 0.48 | MC |
| SRR2154077 | seedling | KDM105_seedling | 3.02 | MC |
| SRR10690151 | leaf | IRBB5_0h | 1.85 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.56 | MC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 0.74 | MC |
| SRR1061625 | panicle | Heat Stress | 0.41 | MC |
| SRR1061624 | panicle | Normal | 0.32 | MC |
| SRR1612403 | leaf | WT wild type (miRNA) | 4.20 | MC |
| SRR1061622 | flag_leaf | Normal | 4.28 | MC |
| SRR1061621 | flag_leaf | Heat Stress | 8.20 | MC |
| SRR1061620 | flag_leaf | Normal | 7.94 | MC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.18 | MC |
| SRR10704058 | leaf | Glyphosate | 1.03 | MC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.10 | MC |
| SRR1013786 | flag_leaf | 93-11_FL | 4.03 | MC |
| SRR504363 | leaf | 93-11 X NPB | 21.46 | MC |
| SRR1013789 | panicle | 93-11_PA | 0.44 | MC |
| SRR1013788 | panicle | LYP9_PA | 2.03 | MC |
| SRR9070101 | shoot_base | WT_base | 0.17 | MC |
| SRR426799 | leaf | mock-treated susceptible rice line | 1.87 | MC |
| SRR089619 | panicle | control | 1.10 | MC |
| SRR447133 | shoot | As(III) 20 uM | 0.46 | MC |
| SRR1849765 | leaf | Control 30min | 6.76 | MC |
| SRR1849767 | leaf | Control 30min | 9.52 | MC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 2.55 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 20.51 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 14.81 | MC |
| SRR6498701 | leaf | "WT, Control" | 29.83 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 8.78 | MC |
| SRR3203907 | leaf | WT | 4.96 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 25.04 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 6.97 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 6.68 | MC |
| SRR12416740 | blade | sRNA_Blade_S1 | 0.30 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 0.30 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 0.45 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 0.30 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 2.12 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 3.44 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 7.54 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 3.06 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 11.31 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 8.51 | MC |
| SRR1849773 | leaf | Control 120min | 13.18 | MC |
| SRR1849772 | leaf | Control 120min | 14.04 | MC |
| SRR1849771 | leaf | Control 120min | 16.79 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 11.61 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 2.11 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 0.43 | MC |
| SRR3130370 | leaf | control 8 hour | 1.21 | MC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 0.61 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.77 | MC |
| SRR7058096 | leaf | rice_mock | 24.86 | MC |
| SRR1742989 | endosperm | 4X_En_sRNA | 0.19 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 0.82 | MC |
| SRR447136 | shoot | As(III) 80 uM | 1.04 | MC |
| SRR5120083 | leaf_sheath | P15_6 | 0.59 | MC |
| SRR10704060 | leaf | Glyphosate | 0.93 | MC |
| SRR2154075 | seed | Taipei309_seed | 0.37 | MC |
| SRR976171 | lamina_joint | wild type | 15.53 | MC |
| SRR4098208 | root | No treatment | 0.27 | MC |
| SRR4098209 | leaf | No treatment | 2.85 | MC |
| SRR3130369 | leaf | control 8 hour | 0.99 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 1.02 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.48 | MC |
| SRR9070100 | shoot_base | WT_base | 0.35 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.72 | MC |
| SRR6810104 | flag_leaf | flag_leaf | 4.66 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.36 | MC |
| SRR3130365 | leaf | control 0 hour | 0.57 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 1.77 | MC |
| SRR3130366 | leaf | control 0 hour | 1.88 | MC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 0.40 | MC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 0.14 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 0.40 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.18 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 30.82 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1.55 | MC |
| SRR2862363 | leaf | mock leaf cells | 41.91 | MC |
| SRR8649147 | panicle | panicle tissue | 0.40 | MC |
| SRR4098207 | panicle | No treatment | 1.01 | MC |
| SRR10704057 | leaf | CK | 0.56 | MC |
| SRR10704056 | leaf | CK | 0.24 | MC |
| SRR10704059 | leaf | Glyphosate | 0.36 | MC |
| SRR1061623 | flag_leaf | Heat Stress | 3.49 | MC |
| SRR9070102 | shoot_base | WT_base | 0.31 | MC |
| SRR6498699 | leaf | "WT, Control" | 24.87 | MC |
| SRR2154078 | seedling | Rathuwee_seedling | 1.36 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.40 | MC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.83 | MC |
| SRR10690144 | leaf | IR24_0h | 0.75 | MC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.35 | MC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 0.83 | MC |
| SRR10690143 | leaf | IR24_0h | 1.80 | MC |
| SRR10690142 | leaf | IR24_0h | 1.19 | MC |
| SRR2646852 | panicle | FP | 0.21 | MC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1.21 | MC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1.20 | MC |
| SRR2646854 | panicle | SP | 0.28 | MC |
| SRR2646855 | panicle | SP | 0.62 | MC |
| SRR4098203 | seedling | No treatment | 4.33 | MC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 0.26 | MC |
| SRR6365690 | seedling | Wild type | 0.70 | MC |
| SRR6365692 | panicle | Wild type | 1.22 | MC |
| SRR6365693 | panicle | Wild type | 0.67 | MC |
| SRR6365694 | panicle | Wild type | 0.78 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.45 | MC |
| SRR6810101 | seedling | seedling | 0.87 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 3.73 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 2.25 | MC |
| SRR5049781 | anther | floret length/mm: >6.5 | 0.30 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 3.53 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 4.14 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 0.72 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 1.32 | MC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.91 | MC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.29 | MC |
| SRR10690153 | leaf | IRBB5_0h | 4.16 | MC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 0.20 | MC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 1.40 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 1.21 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 0.52 | MC |
| SRR3110556 | shoot | shoot control | 13.39 | MC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 0.90 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 1.95 | MC |
| SRR1061616 | panicle | Normal | 0.32 | MC |
| SRR1061617 | panicle | Heat Stress | 1.12 | MC |
| SRR1061614 | panicle | Normal | 0.95 | MC |
| SRR1061615 | panicle | Heat Stress | 1.11 | MC |
| SRR1061612 | panicle | Normal | 1.61 | MC |
| SRR1061613 | panicle | Heat Stress | 1.69 | MC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 0.24 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 2.57 | MC |
| SRR6810103 | flag_leaf | flag_leaf | 3.50 | MC |
| SRR1061618 | flag_leaf | Normal | 0.34 | MC |
| SRR1061619 | flag_leaf | Heat Stress | 0.80 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 4.43 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 3.98 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 5.01 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 0.39 | MC |
| SRR089621 | panicle | cold | 0.60 | MC |
| SRR089620 | panicle | drought | 0.80 | MC |
| SRR089622 | panicle | salt | 0.72 | MC |
| SRR504361 | leaf | Nov-93 | 2.64 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 0.30 | MC |
| SRR4098172 | seedling | Cold (4C) | 1.68 | MC |
| SRR6810102 | seedling | seedling | 4.41 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 5.50 | MC |
| SRR10956502 | panicle | WT | 0.72 | MC |
| SRR10956501 | panicle | WT | 1.17 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 2.50 | MC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 0.24 | MC |
| SRR8258048 | leaf_sheath | R_bph | 3.25 | MC |
| SRR5120080 | leaf_sheath | PC_6 | 0.43 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.71 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 2.55 | MC |
| SRR3110557 | shoot | shoot treated | 5.59 | MC |
| SRR5940086 | panicle | Wild type | 2.73 | MC |
| SRR8258051 | leaf_sheath | R_bph | 2.50 | MC |
| SRR504362 | leaf | NPB X 93-11 | 16.35 | MC |