Chr:
Chr5
Start:
20173002
End:
20173022
Strand:
-
Sequence:
UGAGAUCAAGGGUUGAACAGC
Length:
21
precursor sequence:
UUCCUAUAGGCCACCCAUCGUGAGAUCAAGGGUUGAACAGCUUGGCCUCACCAUUAGUACUUAGUGAGGCCAAGCUGUUCAACCCUUGAUCCCACGAUGUGUAAAGUUUGCCGCCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
125
NEP:
45.62%
LE_num:
LEP:
1.46%
ME_num:
MEP:
47.81%
HE_num:
HEP:
5.11%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.85
Avg Expression:
11.11
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | 3.03145987771581 | 3.90151562348043e-06 |