RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR812c	PmiREN	Chr11	3604005	3604024	+	Y/N
Osa-miR812l	PmiREN	Chr10	13067089	13067110	-	Y/N
Osa-miR812o	PmiREN	Chr11	3914105	3914127	-	Y/N
Osa-miR812h	PmiREN	Chr3	1164963	1164986	-	Y/N
Osa-miR812k	PmiREN	Chr6	19697439	19697458	-	Y/N
Osa-miR812t	PmiREN	Chr9	16214838	16214859	+	Y/N
Osa-miR812u	PmiREN	Chr11	18534922	18534942	+	Y/N
Osa-miR812w	PmiREN	Chr11	26272551	26272572	-	Y/N
Osa-miR812q	PmiREN	Chr4	23192972	23192993	-	Y/N
Osa-miR812r	PmiREN	Chr8	21686719	21686740	-	Y/N
Osa-miR812s	PmiREN	Chr9	8642575	8642596	-	Y/N
Osa-miR812x	PmiREN	Chr4	12430353	12430374	+	Y/N
Osa-miR812y	PmiREN	Chr8	27821214	27821237	+	Y/N
Osa-miR812z	PmiREN	Chr5	20977759	20977780	-	Y/N
Osa-miR1122b	PmiREN	Chr2	977334	977354	-	N/N
Osa-miR1122a	PmiREN	Chr10	18022132	18022152	+	N/N
Osa-miR2122	PmiREN	Chr2	8715263	8715286	+	N/N
Osa-miR2120	PmiREN	Chr2	9175883	9175908	+	N/N
Osa-miR531a	PmiREN	Chr8	1220400	1220421	-	Y/N
Osa-miR531b	PmiREN	Chr1	833967	833989	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR812c

PmiREN

Chr11