Chr:
Chr8
Start:
21686719
End:
21686740
Strand:
-
Sequence:
GACGGUCAAAUGUUAGACACGG
Length:
22
precursor sequence:
AGUGCAGUUUUACACUAUUCACGUUCAACGUUUGAUCGUUCGUCUUAUUUAAAAUUUUUUUAUGAUUAGUAUUUUUAUUGCUAUUAGAUGCUAAAAUAUGAAUAGUACUUUAUGUGUGACUAAUUUUUUUUUUUAUUUUUUUCACAAAUUUUUCAAAUAAGACGGACGGUCAAAUGUUAGACACGGAUAUUCACGGCUGCACUUAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
68
NEP:
24.82%
LE_num:
LEP:
28.1%
ME_num:
MEP:
46.72%
HE_num:
HEP:
0.36%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.87
Avg Expression:
3.21
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | japonica // shoot_base // WT_base--/--japonica // shoot_base // osnrpd1ab_base | -5.68700661879459 | 0.000400515137803815 |