RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR529a	PmiREN	Chr2	16227807	16227827	+	Y/N
Osa-miRN221a	PmiREN	Chr12	11288156	11288175	-	Y/N
Osa-miRN2232h	PmiREN	Chr3	24510613	24510633	-	Y/N
Osa-miR11339ad	PmiREN	Chr1	42099895	42099915	+	N/N
Osa-miRN2232i	PmiREN	Chr12	24283404	24283424	-	Y/Y
Osa-miRN2313	PmiREN	Chr12	21182132	21182152	-	N/Y
Osa-miRN2324	PmiREN	Chr4	17663211	17663231	+	N/Y
Osa-miR11339ag	PmiREN	Chr6	23690441	23690461	+	N/N
Osa-miRN2298b	PmiREN	Chr9	11105872	11105892	-	Y/N
Osa-miRN2314	PmiREN	Chr10	13966518	13966538	+	N/Y
Osa-miRN2298a	PmiREN	Chr6	15278119	15278139	-	Y/N
Osa-miRN2260a	PmiREN	Chr1	38771457	38771477	-	Y/N
Osa-miRN2276e	PmiREN	Chr8	13368415	13368435	-	Y/N
Osa-miRN2303b	PmiREN	Chr6	14075614	14075634	+	N/Y
Osa-miRN2260c	PmiREN	Chr7	1154950	1154970	-	Y/N
Osa-miRN221c	PmiREN	Chr3	31819312	31819331	-	Y/N
Osa-miR2275d	PmiREN	Chr8	3736892	3736912	-	Y/Y
Osa-miR2275e	PmiREN	Chr8	1204908	1204929	+	N/N
Osa-miR2275f	PmiREN	Chr8	4403927	4403947	-	N/N
Osa-miR2275g	PmiREN	Chr8	4404028	4404049	-	N/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR529a

PmiREN

Chr2