Chr:
Chr6
Start:
15278119
End:
15278139
Strand:
-
Sequence:
CGGAGCAGACGGGAUCUCGAC
Length:
21
precursor sequence:
GCAUCCACGUUCCUCAAGGCCGGAGCAGACGGGAUCUCGACCUCGACAUCCGAAUCCCACUUGAACUUGCUAUCAUUGCCACUAUCUUAUGGUAGUGACAUUGAUAGCAAGUUCAAGUGGGAUACGGAUGUCGAGAUCGAGUUCCCGGCUGCUCCAGCCUUGUUGAGCGUGGAUUUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
145
NEP:
52.92%
LE_num:
LEP:
17.15%
ME_num:
MEP:
23.72%
HE_num:
HEP:
6.2%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.76
Avg Expression:
12.33
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_late | 1.41609740450931 | 6.86110221586432e-09 |
| 2 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | 1.34577761594398 | 1.12153649243105e-07 |