Chr:
Chr12
Start:
24283404
End:
24283424
Strand:
-
Sequence:
CAAGUCGUUUCUGAUCGUUGG
Length:
21
precursor sequence:
GUACCAGUACCUCACGGUACCAAGUCGUUUCUGAUCGUUGGAUCUAAAAAUGCCCAUUCUAUCCAGCUAGAUUCAAUGAUCGGAAAUAAUUUAGUACCGUGAGGUACCGGUACCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
130
NEP:
47.45%
LE_num:
LEP:
22.26%
ME_num:
MEP:
14.23%
HE_num:
HEP:
16.06%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.93
Avg Expression:
42.57
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | 4.32202266848382 | 0.0474872712567673 |