RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR818b	PmiREN	Chr2	4007276	4007301	+	N/N
Osa-miRN2351	PmiREN	Chr12	24395829	24395849	-	N/Y
Osa-miRN2352	PmiREN	Chr12	18628386	18628406	-	N/N
Osa-miR818a	PmiREN	Chr2	28768227	28768250	+	Y/N
Osa-miR1846g	PmiREN	Chr11	21603039	21603059	-	Y/Y
Osa-miR1846f	PmiREN	Chr10	6857378	6857397	-	Y/N
Osa-miR1846e	PmiREN	Chr9	13211472	13211495	-	Y/N
Osa-miR11337l	PmiREN	Chr4	14006148	14006168	+	N/N
Osa-miR2118l	PmiREN	Chr11	7810747	7810768	-	Y/Y
Osa-miR2118i	PmiREN	Chr11	7810261	7810282	-	Y/N
Osa-miRN2321	PmiREN	Chr2	10642797	10642817	+	N/Y
Osa-miRN2320	PmiREN	Chr1	19145141	19145161	-	N/Y
Osa-miRN2278	PmiREN	Chr2	20259532	20259552	+	Y/Y
Osa-miR3982	PmiREN	Chr11	1384746	1384766	-	Y/Y
Osa-miRN2327	PmiREN	Chr5	6140527	6140547	-	N/Y
Osa-miRN2326	PmiREN	Chr5	13984508	13984528	-	N/Y
Osa-miR11337p	PmiREN	Chr9	15244712	15244732	+	Y/N
Osa-miR11337q	PmiREN	Chr12	4776554	4776575	-	Y/N
Osa-miR11337r	PmiREN	Chr2	6143086	6143107	-	Y/N
Osa-miR11337s	PmiREN	Chr3	31459681	31459702	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR818b

PmiREN

Chr2