Chr:
Chr2
Start:
6143086
End:
6143107
Strand:
-
Sequence:
UUGCGAGACGAAUCUAACGAGA
Length:
22
precursor sequence:
UUCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAACGAGAUAUAUUAAUCCAUGAUUUGCUACAGUGAUGCUACAGUAAUCAGCCGCUAAUUAUGGAUUAAUAUACAUCAUUAGAUUUAUCUCGCAAAAUAGCCUAGGGGUUAUGGAAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
41
NEP:
14.96%
LE_num:
LEP:
25.18%
ME_num:
MEP:
59.85%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot_base
Tau :
0.80
Avg Expression:
3.18
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | 1.28476331922616 | 0.0230341100120871 |
2 | japonica // shoot_base // WT_base--/--japonica // shoot_base // osnrpd1ab_base | -2.28518454083796 | 3.61499840428797e-10 |