Chr:
Chr11
Start:
1384746
End:
1384766
Strand:
-
Sequence:
UAGUUGCCUACAUGGAGCGCC
Length:
21
precursor sequence:
GAGGCUGACCGCCGAUGUGGCGCUCCACGUAGGCAACAAUUUUGCAUCCGGCCCCCUUUUGCAGGACAGCGUGGUGGUAAUAUUGUACUUAGCCCCUUUGAGCCACAGUACCACCCCGAAACUCCCCGAAAUCCCCAAAUCCCUCCUCCCUCACAGGAGCUCAAAGGAGCUAAGUGCAAUUUUUGGAUGAGGCUGGACGCAAAAUAGUUGCCUACAUGGAGCGCCACGUCGUCGGUCAGCCCUGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
14
NEP:
5.11%
LE_num:
LEP:
12.77%
ME_num:
MEP:
74.09%
HE_num:
HEP:
8.03%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.92
Avg Expression:
38.60
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -3.20664889523986 | 0.004914616185541 |
| 2 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | 1.69457872366449 | 0.0433881457929485 |