Chr:
Chr11
Start:
21603039
End:
21603059
Strand:
-
Sequence:
UGACCCCGUUCUCCUCGCCGG
Length:
21
precursor sequence:
AACGAGUCGCCGGAUCUCCCCGUGAGGAGGCCGGGGCCGCCGGAUCCAGUGACCCCGUUCUCCUCGCCGGCGGAUCCGGCAGCCCAGAGA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
79
NEP:
28.83%
LE_num:
LEP:
22.99%
ME_num:
MEP:
40.51%
HE_num:
HEP:
7.66%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.96
Avg Expression:
19.38
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | -1.78678398599726 | 1.17100736719699e-05 |
| 2 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_8h | -1.20647456613711 | 0.0341636936237383 |
| 3 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_24h | -2.12711505440672 | 3.4277314658636e-13 |
| 4 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -2.07809370814852 | 2.71087189758516e-09 |
| 5 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | -3.40017312097354 | 0.0130130215006155 |