RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN2228b	PmiREN	Chr8	4435491	4435511	-	N/Y
Osa-miRN2232d	PmiREN	Chr9	6711930	6711950	-	Y/N
Osa-miRN2232e	PmiREN	Chr1	26307378	26307398	+	Y/N
Osa-miRN2232b	PmiREN	Chr6	8837476	8837496	+	Y/N
Osa-miRN2232c	PmiREN	Chr7	24306549	24306569	-	Y/N
Osa-miR11340	PmiREN	Chr6	7715339	7715361	+	N/N
Osa-miR2871	PmiREN	Chr4	8340904	8340924	+	Y/N
Osa-miRN2232j	PmiREN	Chr12	25611723	25611743	+	Y/N
Osa-miR2876	PmiREN	Chr6	17008984	17009005	-	Y/N
Osa-miRN2203b	PmiREN	Chr1	7857738	7857758	+	Y/N
Osa-miRN2203a	PmiREN	Chr1	25180654	25180674	+	Y/N
Osa-miR3979	PmiREN	Chr11	19480162	19480182	+	Y/Y
Osa-miRN2309c	PmiREN	Chr3	33124849	33124869	-	N/Y
Osa-miRN2309b	PmiREN	Chr10	20405654	20405674	-	N/Y
Osa-miRN2309a	PmiREN	Chr7	29070631	29070652	+	Y/N
Osa-miRN2332	PmiREN	Chr9	8961276	8961296	-	N/N
Osa-miRN2354	PmiREN	Chr12	24297192	24297212	+	Y/N
Osa-miRN2355	PmiREN	Chr1	20077203	20077223	+	N/N
Osa-miRN2356	PmiREN	Chr2	20358270	20358290	-	N/N
Osa-miR1846h	PmiREN	Chr2	26544128	26544147	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN2228b

PmiREN

Chr8