Chr:
Chr12
Start:
24297192
End:
24297212
Strand:
+
Sequence:
CACCUAGGACAAUGGCGGCUC
Length:
21
precursor sequence:
UUUUCAAGAAUUUCAAUGUGGCGUGCUGUUGGCCUAGGAGGCAUCAGGACUUCUCAUGUAGCACCUAGGACAAUGGCGGCUCGAUUUUUUUGGUGCAACGGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
213
NEP:
77.74%
LE_num:
LEP:
4.38%
ME_num:
MEP:
15.33%
HE_num:
HEP:
2.55%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.94
Avg Expression:
7.41
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | zhonghua11 // panicle // wild-type--/--zhonghua11 // panicle // rdr701-1 mutant | -3.92873960772504 | 1.28921470096154e-10 |