RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR395t	PmiREN	Chr9	6607390	6607412	-	N/N
Osa-miR2106	PmiREN	Chr2	23768618	23768641	-	Y/N
Osa-miR5819b	PmiREN	Chr1	38527800	38527820	+	N/N
Osa-miR11337g	PmiREN	Chr1	25287023	25287043	+	Y/N
Osa-miRN2371	PmiREN	Chr11	25080569	25080589	-	Y/Y
Osa-miRN2280	PmiREN	Chr1	33588810	33588830	+	Y/N
Osa-miR171h	PmiREN	Chr4	28482510	28482530	+	Y/Y
Osa-miR5795b	PmiREN	Chr10	6427387	6427408	-	Y/N
Osa-miR171a	PmiREN	Chr6	25891201	25891221	+	Y/N
Osa-miR171g	PmiREN	Chr7	15636749	15636770	-	Y/Y
Osa-miR1861k	PmiREN	Chr9	13532666	13532686	+	Y/N
Osa-miR1861d	PmiREN	Chr4	6536355	6536375	+	Y/N
Osa-miR1861e	PmiREN	Chr8	15132585	15132605	-	Y/N
Osa-miR1861g	PmiREN	Chr12	16586413	16586433	-	Y/Y
Osa-miR1861a	PmiREN	Chr4	6536571	6536591	+	Y/N
Osa-miR1861c	PmiREN	Chr2	20716240	20716262	+	Y/N
Osa-miR168	PmiREN	Chr2	1553210	1553230	-	Y/N
Osa-miR5788a	PmiREN	Chr3	30006963	30006983	+	Y/N
Osa-miR5788b	PmiREN	Chr1	38985769	38985789	-	N/N
Osa-miR5788c	PmiREN	Chr2	27384263	27384283	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR395t

PmiREN

Chr9