Chr:
Chr11
Start:
25080569
End:
25080589
Strand:
-
Sequence:
UUGCAGUCGAUAGUGGAAGAC
Length:
21
precursor sequence:
UAAGUAAUUAUUAAUUCUUUUACUAUCAUUUGAUUCAUUGUUAAAUAUAAUUUUAUGUAUACAUAUAGUUUUACAUAUUUCACAAAAGUUUUUGAAUAAGACGAAUGGUCAAAUAUGUUUAAUAAAGUUAACGGCGUCAAAGGGAAGGAGGGAGUAUAUUUUUUCUUUCUUUUCUCUUUCUUUUUUUUUUGUCUGGUAGUCACAAUGUUGCAGUCGAUAGUGGAAGACAGUGUGAACUACGUGCAGGUGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
194
NEP:
70.8%
LE_num:
LEP:
4.38%
ME_num:
MEP:
7.3%
HE_num:
HEP:
17.52%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.93
Avg Expression:
72.63
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -1.49894039618649 | 6.19775153005759e-12 |