RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR11339ab	PmiREN	Chr8	23267654	23267675	+	N/N
Osa-miR11339ac	PmiREN	Chr10	1429973	1429993	+	N/N
Osa-miR11339ae	PmiREN	Chr2	19576181	19576201	+	N/N
Osa-miR11339af	PmiREN	Chr3	5460796	5460816	+	N/N
Osa-miR1883	PmiREN	Chr11	13523542	13523565	+	Y/N
Osa-miR11339ah	PmiREN	Chr1	10371867	10371892	+	N/N
Osa-miR1441	PmiREN	Chr12	19485783	19485808	-	Y/N
Osa-miR5485	PmiREN	Chr3	22088085	22088105	-	Y/N
Osa-miR812an	PmiREN	Chr1	15765333	15765354	+	Y/N
Osa-miRN2164b	PmiREN	Chr1	34779342	34779362	+	Y/N
Osa-miRN2164c	PmiREN	Chr1	9049212	9049232	+	Y/N
Osa-miRN2164f	PmiREN	Chr7	27813203	27813223	+	Y/N
Osa-miRN2164g	PmiREN	Chr9	1319732	1319752	+	Y/N
Osa-miR812ao	PmiREN	Chr5	5651689	5651710	+	Y/N
Osa-miRN2232g	PmiREN	Chr12	18328189	18328209	+	Y/N
Osa-miR395r	PmiREN	Chr4	32622858	32622879	+	Y/N
Osa-miR5788e	PmiREN	Chr3	4209193	4209213	+	Y/N
Osa-miRN2323c	PmiREN	Chr9	15088792	15088812	-	N/Y
Osa-miRN2323b	PmiREN	Chr7	16779471	16779491	-	N/Y
Osa-miRN2323a	PmiREN	Chr3	23448549	23448569	+	N/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR11339ab

PmiREN

Chr8