Chr:
Chr9
Start:
1319732
End:
1319752
Strand:
+
Sequence:
UUCAUCUAGUAUGAGGACGUG
Length:
21
precursor sequence:
UGAUAUGACGACGUGGUUGUUUCAUCUAGUAUGAGGACGUGGUAUCAUAUUAAUUUCGUGCGAUGGCUGGUAAUAGGAUGCUAUGUCCUCGUCCUAGGUGAAACAACCACAUCAUCUCGCGGGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
32
NEP:
11.68%
LE_num:
LEP:
17.15%
ME_num:
MEP:
68.25%
HE_num:
HEP:
2.92%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot_base
Tau :
0.87
Avg Expression:
14.54
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | 1.42964687450574 | 0.00251167568502964 |
2 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | 3.96612854294731 | 0.0316131712949105 |