RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Confidence	Chromosome	Start	End	Strand	DE/TSE
Osa-miR2865	miRbase/PmiREN	/	Chr9	8515762	8515785	-	Y/N
osa-miR2866	miRbase		Chr3	7331671	7331690	-	N/N
osa-miR2867-5p	miRbase		Chr11	16277662	16277683	+	N/N
Osa-miR2867	miRbase/PmiREN	/	Chr11	16277721	16277740	+	N/Y
osa-miR2868	miRbase		Chr11	17938280	17938299	+	N/N
osa-miR2869	miRbase		Chr5	26915339	26915359	-	N/N
osa-miR2870	miRbase		Chr1	27181881	27181901	-	N/N
Osa-miR2863b	miRbase/PmiREN	/	Chr2	4195675	4195695	-	Y/N
osa-miR2905	miRbase		Chr3	13591904	13591924	-	Y/N
osa-miR2871a-5p	miRbase		Chr5	3877019	3877042	+	Y/N
osa-miR2871a-3p	miRbase		Chr5	3877104	3877124	+	Y/N
osa-miR2871b-5p	miRbase		Chr4	8340811	8340834	+	Y/Y
osa-miR2871b-3p	miRbase		Chr4	8340904	8340924	+	Y/N
osa-miR2872	miRbase		Chr11	2525324	2525344	+	N/N
Osa-miR2873a	miRbase/PmiREN	/	Chr11	28933585	28933608	-	Y/N
osa-miR2874	miRbase		Chr8	15598096	15598119	+	Y/N
osa-miR2875	miRbase		Chr8	27092100	27092123	+	N/N
osa-miR2876-5p	miRbase		Chr6	17009125	17009145	-	N/N
osa-miR2876-3p	miRbase		Chr6	17008985	17009005	-	Y/N
Osa-miR2877	miRbase/PmiREN	/	Chr4	28585254	28585279	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR2865

miRbase/PmiREN

Chr9