Chr:
Chr8
Start:
15598096
End:
15598119
Strand:
+
Sequence:
AUGUGAACAGUGUCAAACAGUGUC
Length:
24
precursor sequence:
ACACUAUGUUUGCACUGUUUGGAACUGUUCACAUGUUGGUUCCCGGCAGUAAAACUGCUGGAACUAACAUGUGAACAGUGUCAAACAGUGUCAAAUAGUGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
108
NEP:
39.42%
LE_num:
LEP:
7.66%
ME_num:
MEP:
47.08%
HE_num:
HEP:
5.84%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.88
Avg Expression:
35.56
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | -1.23422560743664 | 0.00674841109061647 |
| 2 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | 2.63929601173632 | 0.0177059547522436 |