| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 6.21 | MC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 6.39 | MC |
| SRR8258050 | leaf_sheath | R_bph | 7.86 | MC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 3.71 | MC |
| SRR8258059 | leaf_sheath | R_bph_late | 4.93 | MC |
| SRR8258058 | leaf_sheath | R_bph_late | 4.17 | MC |
| SRR7058097 | leaf | rice_mock | 0.50 | MC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 3.74 | MC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 2.94 | MC |
| SRR7058098 | leaf | rice_RSV | 0.96 | MC |
| SRR2154073 | seed | Heukgyeong_seed | 0.18 | MC |
| SRR2154071 | seed | KDM105_seed | 0.25 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 1.28 | MC |
| SRR10704058 | leaf | Glyphosate | 2.80 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.52 | MC |
| SRR504363 | leaf | 93-11 X NPB | 0.72 | MC |
| SRR9070101 | shoot_base | WT_base | 0.69 | MC |
| SRR089619 | panicle | control | 3.47 | MC |
| SRR447135 | shoot | As(III) 20 uM | 0.54 | MC |
| SRR447133 | shoot | As(III) 20 uM | 0.46 | MC |
| SRR1849767 | leaf | Control 30min | 2.72 | MC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 5.43 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 1.02 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 3.56 | MC |
| SRR6498701 | leaf | "WT, Control" | 2.32 | MC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 5.05 | MC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 3.39 | MC |
| SRR12416749 | blade | sRNA_Blade_S5 | 6.29 | MC |
| SRR12416748 | blade | sRNA_Blade_S5 | 4.95 | MC |
| SRR12416741 | blade | sRNA_Blade_S1 | 4.50 | MC |
| SRR12416743 | blade | sRNA_Blade_S2 | 3.42 | MC |
| SRR12416742 | blade | sRNA_Blade_S2 | 4.12 | MC |
| SRR12416745 | blade | sRNA_Blade_S3 | 8.12 | MC |
| SRR12416744 | blade | sRNA_Blade_S3 | 6.48 | MC |
| SRR12416747 | blade | sRNA_Blade_S4 | 4.49 | MC |
| SRR12416746 | blade | sRNA_Blade_S4 | 8.95 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.78 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.66 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.56 | MC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 0.76 | MC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 1.89 | MC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 2.13 | MC |
| SRR1849773 | leaf | Control 120min | 6.04 | MC |
| SRR1849772 | leaf | Control 120min | 1.22 | MC |
| SRR1849771 | leaf | Control 120min | 3.95 | MC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 3.17 | MC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 0.35 | MC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 0.51 | MC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 0.21 | MC |
| SRR7058096 | leaf | rice_mock | 1.19 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.52 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.15 | MC |
| SRR10704060 | leaf | Glyphosate | 0.92 | MC |
| SRR2154075 | seed | Taipei309_seed | 0.31 | MC |
| SRR976171 | lamina_joint | wild type | 4.28 | MC |
| SRR4098208 | root | No treatment | 1.71 | MC |
| SRR3130369 | leaf | control 8 hour | 0.34 | MC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 0.50 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.60 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.22 | MC |
| SRR9070100 | shoot_base | WT_base | 0.78 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.52 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.89 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.26 | MC |
| SRR3130365 | leaf | control 0 hour | 0.68 | MC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.68 | MC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 0.49 | MC |
| SRR2862364 | leaf | mock leaf cells | 0.97 | MC |
| SRR2862365 | leaf | mock leaf cells | 0.65 | MC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 2.31 | MC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 1.12 | MC |
| SRR2862363 | leaf | mock leaf cells | 2.78 | MC |
| SRR4098207 | panicle | No treatment | 2.27 | MC |
| SRR10704055 | leaf | CK | 4.02 | MC |
| SRR10704057 | leaf | CK | 3.43 | MC |
| SRR10704056 | leaf | CK | 2.93 | MC |
| SRR10704059 | leaf | Glyphosate | 9.90 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.53 | MC |
| SRR9070102 | shoot_base | WT_base | 0.43 | MC |
| SRR6498699 | leaf | "WT, Control" | 3.27 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.21 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.23 | MC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.59 | MC |
| SRR6365694 | panicle | Wild type | 0.32 | MC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 0.60 | MC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 3.28 | MC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 2.00 | MC |
| SRR8258063 | leaf_sheath | S_bph feeding | 8.74 | MC |
| SRR8258060 | leaf_sheath | R_bph_late | 3.53 | MC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 1.21 | MC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 2.32 | MC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 4.27 | MC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 5.09 | MC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 3.02 | MC |
| SRR3110556 | shoot | shoot control | 19.84 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.45 | MC |
| SRR1061613 | panicle | Heat Stress | 0.42 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.59 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 5.80 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.07 | MC |
| SRR447127 | root | control for As(III) 20/80 uM | 0.60 | MC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 1.96 | MC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 1.52 | MC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 3.65 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 2.24 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.51 | MC |
| SRR089621 | panicle | cold | 2.81 | MC |
| SRR089620 | panicle | drought | 3.44 | MC |
| SRR089622 | panicle | salt | 2.15 | MC |
| SRR504360 | leaf | Nipponbare | 1.29 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 2.26 | MC |
| SRR2544786 | embryo | dry seed | 1.72 | MC |
| SRR4098172 | seedling | Cold (4C) | 10.15 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.48 | MC |
| SRR6810102 | seedling | seedling | 0.93 | MC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 1.83 | MC |
| SRR10956502 | panicle | WT | 0.88 | MC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 1.28 | MC |
| SRR10956501 | panicle | WT | 1.51 | MC |
| SRR8258065 | leaf_sheath | S_bph feeding | 7.50 | MC |
| SRR8258048 | leaf_sheath | R_bph | 12.53 | MC |
| SRR2154080 | seedling | Nipponbare_seedling | 0.47 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.16 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.62 | MC |
| SRR8258061 | leaf_sheath | S_bph feeding | 9.63 | MC |
| SRR3110557 | shoot | shoot treated | 30.52 | MC |
| SRR5940086 | panicle | Wild type | 0.39 | MC |
| SRR8258051 | leaf_sheath | R_bph | 12.22 | MC |
| SRR504362 | leaf | NPB X 93-11 | 1.75 | MC |