RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Confidence	Chromosome	Start	End	Strand	DE/TSE
osa-miR820c	miRbase		Chr10	6928685	6928705	+	Y/N
osa-miR821a	miRbase		Chr3	22974239	22974262	+	N/N
osa-miR821b	miRbase		Chr7	16417245	16417268	+	N/N
osa-miR821c	miRbase		Chr8	19925361	19925384	-	N/N
Osa-miR529b	miRbase/PmiREN	/	Chr4	15883042	15883062	+	Y/Y
osa-miR1423-5p	miRbase		Chr4	19715137	19715160	+	Y/N
osa-miR1423-3p	miRbase		Chr4	19715211	19715231	+	Y/N
osa-miR1424	miRbase		Chr7	26662366	26662386	-	N/N
Osa-miR1425	miRbase/PmiREN	/	Chr5	8862162	8862182	+	Y/N
osa-miR1425-3p	miRbase		Chr5	8862219	8862239	+	Y/N
osa-miR1426	miRbase		Chr1	7189323	7189343	-	N/N
Osa-miR1427	miRbase/PmiREN	/	Chr8	9192766	9192786	+	Y/N
osa-miR1428a-5p	miRbase		Chr1	13160785	13160805	+	Y/N
osa-miR1428a-3p	miRbase		Chr1	13160865	13160885	+	N/N
osa-miR1429-5p	miRbase		Chr8	2037052	2037072	-	N/Y
osa-miR1429-3p	miRbase		Chr8	2036954	2036974	-	Y/N
osa-miR1430	miRbase		Chr12	6825025	6825045	-	Y/Y
Osa-miR1431	miRbase/PmiREN	/	Chr1	4766355	4766375	-	Y/Y
osa-miR1432-5p	miRbase		Chr7	23401784	23401804	-	Y/Y
osa-miR1432-3p	miRbase		Chr7	23401707	23401727	-	Y/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

osa-miR820c

miRbase

Chr10