RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR11339x	PmiREN	Chr6	14421356	14421377	-	N/N
Osa-miR11339y	PmiREN	Chr6	12344123	12344144	-	N/N
Osa-miR439c	PmiREN	Chr1	18021796	18021817	+	Y/N
Osa-miR439b	PmiREN	Chr10	5572955	5572978	+	Y/N
Osa-miR439a	PmiREN	Chr7	8233877	8233900	+	N/N
Osa-miR439g	PmiREN	Chr8	3664278	3664301	+	N/N
Osa-miR439f	PmiREN	Chr9	16963079	16963102	+	N/N
Osa-miR439d	PmiREN	Chr6	1553137	1553160	-	N/N
Osa-miR5160	PmiREN	Chr7	23952866	23952889	-	Y/N
Osa-miR1862f	PmiREN	Chr3	29954038	29954057	+	N/Y
Osa-miR1862a	PmiREN	Chr5	1928707	1928726	+	Y/Y
Osa-miRN2273	PmiREN	Chr3	32487508	32487528	+	Y/Y
Osa-miRN2272	PmiREN	Chr12	22069226	22069246	-	N/Y
Osa-miRN2271	PmiREN	Chr4	18477956	18477977	+	Y/N
Osa-miRN2270	PmiREN	Chr10	10862757	10862776	+	Y/N
Osa-miRN2277	PmiREN	Chr9	6620328	6620348	+	N/N
Osa-miR1862h	PmiREN	Chr10	3413461	3413482	-	Y/N
Osa-miRN2275	PmiREN	Chr4	17660213	17660233	+	Y/Y
Osa-miRN2274	PmiREN	Chr6	9588773	9588793	+	N/Y
Osa-miR11339aa	PmiREN	Chr7	21696587	21696608	-	N/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR11339x

PmiREN

Chr6