Chr:
Chr10
Start:
3413461
End:
3413482
Strand:
-
Sequence:
UAGGUUUGUUUAUUUUGGGACG
Length:
22
precursor sequence:
GGUUAUGUCCCAUCCAAUCCUAGGUUUGUUUAUUUUGGGACGGAGGGAGUAAGGUACAAUGCUAUGUAUCAUCCCACAAAAUAUCAAAGUAAAACACAACUUACAGAGUAAUAACAAAGAAAAAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
3
NEP:
1.09%
LE_num:
0
LEP:
0.0%
ME_num:
MEP:
35.04%
HE_num:
HEP:
63.87%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.69
Avg Expression:
180.41
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | -1.93867529630358 | 0.0331437075011459 |