RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR395l	PmiREN	Chr8	3300071	3300091	+	Y/N
Osa-miR395m	PmiREN	Chr4	32622093	32622113	+	Y/N
Osa-miR395o	PmiREN	Chr4	32622429	32622450	+	N/N
Osa-miR11337h	PmiREN	Chr1	29451486	29451506	-	Y/N
Osa-miRN2364	PmiREN	Chr6	28324494	28324514	+	N/Y
Osa-miR5795c	PmiREN	Chr4	11400635	11400656	-	Y/N
Osa-miR11337i	PmiREN	Chr2	32851465	32851485	-	Y/N
Osa-miRN2256	PmiREN	Chr4	20988745	20988765	+	N/Y
Osa-miR11337j	PmiREN	Chr3	32923087	32923107	+	Y/N
Osa-miRN2310	PmiREN	Chr8	17848878	17848899	-	Y/N
Osa-miR11337k	PmiREN	Chr3	4737493	4737513	-	Y/N
Osa-miRN2311	PmiREN	Chr6	992257	992278	+	Y/N
Osa-miRN2312	PmiREN	Chr6	24608747	24608767	-	Y/Y
Osa-miR11337m	PmiREN	Chr5	22461929	22461949	+	Y/N
Osa-miR1428d	PmiREN	Chr3	23077370	23077392	+	N/N
Osa-miR1428c	PmiREN	Chr2	2535131	2535153	+	N/N
Osa-miR1428b	PmiREN	Chr7	18161294	18161315	+	Y/N
Osa-miR1428a	PmiREN	Chr1	13160785	13160806	+	Y/N
Osa-miR5809a	PmiREN	Chr3	7799985	7800005	+	Y/N
Osa-miRN221d	PmiREN	Chr10	10858115	10858134	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR395l

PmiREN

Chr8